RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SLCO5A1Q9H2Y9 848 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 NELFAQ9H3P2 528 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 NOX4Q9NPH5 578 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 SLCO1C1Q9NYB5 712 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 POLR1DQ9Y2S0 133 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 AK6Q9Y3D8 172 aaKnown RBP11.64□□□□□ -0.55
VRK3-205ENST00000593919 LHFPL6Q9Y693 200 aa11.64□□□□□ -0.55
VRK3-205ENST00000593919 ACOD1A6NK06 481 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 NOTOA8MTQ0 251 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 LYRM1O43325 122 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 GPRIN2O60269 458 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 CD1AP06126 327 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 ATF1P18846 271 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 NPR2P20594 1047 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 GUCA1AP43080 201 aaPredicted RBP11.63□□□□□ -0.55
VRK3-205ENST00000593919 ZNF84P51523 738 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 NKX2-5P52952 324 aaPredicted RBP11.63□□□□□ -0.55
VRK3-205ENST00000593919 KCNMB1Q16558 191 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 SGCAQ16586 387 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 RIPPLY2Q5TAB7 128 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 TSPO2Q5TGU0 170 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 MZT2BQ6NZ67 158 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 FOXL2NBQ6ZUU3 175 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 ZNF679Q8IYX0 411 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 RDH10Q8IZV5 341 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 NABP1Q96AH0 204 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 TRIB1Q96RU8 372 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 WACQ9BTA9 647 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 SLC25A18Q9H1K4 315 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 PARPBPQ9NWS1 579 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 NPAP1Q9NZP6 1156 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 A8MV72 311 aaPredicted RBP11.63□□□□□ -0.55
VRK3-205ENST00000593919 ZNF879B4DU55 563 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 TACSTD2P09758 323 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 EPXP11678 715 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 MSR1P21757 451 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 AGTR1P30556 359 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 ROM1Q03395 351 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 CEP78Q5JTW2 689 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 KCTD18Q6PI47 426 aaPredicted RBP11.63□□□□□ -0.55
VRK3-205ENST00000593919 UNQ9370/PRO34162Q6UXP9 181 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 P4HA3Q7Z4N8 544 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 RGP1Q92546 391 aaPredicted RBP11.63□□□□□ -0.55
VRK3-205ENST00000593919 MAP6Q96JE9 813 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 ZNF416Q9BWM5 594 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 RNF121Q9H920 327 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 ELOVL3Q9HB03 270 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 BRD7Q9NPI1 651 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 SLC7A10Q9NS82 523 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 ASH2LQ9UBL3 628 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 TUBD1Q9UJT1 453 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 ZNF281Q9Y2X9 895 aa11.63□□□□□ -0.55
VRK3-205ENST00000593919 PIN1P1O15428 100 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 ZFPL1O95159 310 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 PITPNBP48739 271 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 SWI5Q1ZZU3 235 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 CEACAM16Q2WEN9 425 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 ZNF324BQ6AW86 544 aaPredicted RBP11.62□□□□□ -0.55
VRK3-205ENST00000593919 OR7E24Q6IFN5 339 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 PLET1Q6UQ28 207 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 CFAP77Q6ZQR2 320 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 UTS2BQ765I0 119 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 NUFIP2Q7Z417 695 aaKnown RBP11.62□□□□□ -0.55
VRK3-205ENST00000593919 KRT77Q7Z794 578 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 CPT1CQ8TCG5 803 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 RPS4Y2Q8TD47 263 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 APH1AQ96BI3 265 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 GPR35Q9HC97 309 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 GP6Q9HCN6 339 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 RBFOX1Q9NWB1 397 aaKnown RBP11.62□□□□□ -0.55
VRK3-205ENST00000593919 GDF2Q9UK05 429 aaPredicted RBP11.62□□□□□ -0.55
VRK3-205ENST00000593919 ZNF221Q9UK13 617 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 POU2F3Q9UKI9 436 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 LRP12Q9Y561 859 aa11.62□□□□□ -0.55
VRK3-205ENST00000593919 FAM240BA0A1B0GVZ2 78 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 LANCL1O43813 399 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 KRT33AO76009 404 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 SRMP19623 302 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 LSM6P62312 80 aaKnown RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 MRPS34P82930 218 aaKnown RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 ALKBH1Q13686 389 aaKnown RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 KCNJ8Q15842 424 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 ACSF3Q4G176 576 aaPredicted RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 RNASE12Q5GAN4 147 aaKnown RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 ZNF585AQ6P3V2 769 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 GCNT2Q8N0V5 402 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 LRRC18Q8N456 261 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 CISD2Q8N5K1 135 aaKnown RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 OR10S1Q8NGN2 331 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 OR2AJ1Q8NGZ0 328 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 UBASH3BQ8TF42 649 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 RNF133Q8WVZ7 376 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 RFT1Q96AA3 541 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 GMPPAQ96IJ6 420 aaPredicted RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 LINC00470Q9BZP3 86 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 C1orf198Q9H425 327 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 TMEM38BQ9NVV0 291 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 NLKQ9UBE8 527 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 A0A0B4J293 547 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 HSPB2A8KAH6 182 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms