RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 FGGYQ96C11 551 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 HYLS1Q96M11 299 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 PIGQQ9BRB3 760 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 GPR87Q9BY21 358 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 GLTPQ9NZD2 209 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 PCDHGA1Q9Y5H4 931 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 FABP7O15540 132 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 HSD11B1P28845 292 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 FAUP35544 74 aaKnown RBP17.43■□□□□ 0.38
CLIP3-206ENST00000593074 VEGFCP49767 419 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 CAPZA1P52907 286 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 RAC1P63000 192 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 SSBP1Q04837 148 aaKnown RBP17.43■□□□□ 0.38
CLIP3-206ENST00000593074 LINC00303Q3SY05 128 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 C10orf128Q5T292 105 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 ZNF529Q6P280 563 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 OR1J2Q8NGS2 313 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 SORCS2Q96PQ0 1159 aa17.43■□□□□ 0.38
CLIP3-206ENST00000593074 A0A0A6YYH2 397 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 A0A1B0GTI1 187 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 A6NJ64 397 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 NDUFB6O95139 128 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 CXCL3P19876 107 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 MECP2P51608 486 aaKnown RBP17.42■□□□□ 0.38
CLIP3-206ENST00000593074 SPEM2Q0P670 501 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
CLIP3-206ENST00000593074 BEST4Q8NFU0 473 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 TMEM54Q969K7 222 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 ADAT3Q96EY9 351 aaPredicted RBP17.42■□□□□ 0.38
CLIP3-206ENST00000593074 MS4A3Q96HJ5 214 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 NAA11Q9BSU3 229 aaPredicted RBP17.42■□□□□ 0.38
CLIP3-206ENST00000593074 OR10A4Q9H209 315 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 PCSK5Q92824 1860 aa17.42■□□□□ 0.38
CLIP3-206ENST00000593074 C21orf140B9A014 251 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 ARPC1BO15143 372 aaKnown RBP17.41■□□□□ 0.38
CLIP3-206ENST00000593074 RER1O15258 196 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 HPXP02790 462 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 BDKRB2P30411 391 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 SRD5A2P31213 254 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 PRSS3P35030 304 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 DLSTP36957 453 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 CSNK1A1P48729 337 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 B3GALT5-AS1P59052 145 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 LSM6P62312 80 aaKnown RBP17.41■□□□□ 0.38
CLIP3-206ENST00000593074 GUCA2AQ02747 115 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 LAMTOR1Q6IAA8 161 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 SEZ6L2Q6UXD5 910 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 FOXL2NBQ6ZUU3 175 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 SLC7A5P1Q8MH63 180 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 TMEM123Q8N131 208 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 OR4D6Q8NGJ1 314 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 GPX8Q8TED1 209 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 UCN2Q96RP3 112 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 GON7Q9BXV9 100 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 NOX3Q9HBY0 568 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 ZNF222Q9UK12 451 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 A0A0G2JMM0 328 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 A0A1W2PPB8 328 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 A0A1W2PRS3 328 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 KIR3DP1A8MWS1 328 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 METTL11BQ5VVY1 283 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 LUZP2Q86TE4 346 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 OR9K2Q8NGE7 335 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 OR4C16Q8NGL9 310 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 OR51E1Q8TCB6 317 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 ZNF385AQ96PM9 386 aaKnown RBP17.41■□□□□ 0.38
CLIP3-206ENST00000593074 BEX1Q9HBH7 125 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 TMEM138Q9NPI0 162 aa17.41■□□□□ 0.38
CLIP3-206ENST00000593074 MEIKINA0A087WXM9 373 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 IGHV3-15A0A0B4J1V0 119 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 A0A0J9YW62 118 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 A0A1B0GVI7 797 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 GJE1A6NN92 205 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 NPIPA2E9PIF3 369 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 NPIPA3F8WFD2 350 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 SULT1C2O00338 296 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 DNPH1O43598 174 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 ICMTO60725 284 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 RAB6AP20340 208 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 ZNF121P58317 390 aaPredicted RBP17.4■□□□□ 0.38
CLIP3-206ENST00000593074 TAF13Q15543 124 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 HES3Q5TGS1 186 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 OR1M1Q8NGA1 313 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 OR8B12Q8NGG6 310 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 DACT3Q96B18 629 aaPredicted RBP17.4■□□□□ 0.38
CLIP3-206ENST00000593074 CNTD2Q9H8S5 307 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 ZFP64Q9NPA5 681 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 KIAA1549Q9HCM3 1950 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 TNFSF11O14788 317 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 SSNA1O43805 119 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 MSR1P21757 451 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 GNALP38405 381 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 GRB2P62993 217 aaKnown RBP17.4■□□□□ 0.38
CLIP3-206ENST00000593074 PHYHD1Q5SRE7 291 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 CLEC1AQ8NC01 280 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 OR5D14Q8NGL3 314 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 OR6N1Q8NGY5 312 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 MED30Q96HR3 178 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 UQCC2Q9BRT2 126 aa17.4■□□□□ 0.38
CLIP3-206ENST00000593074 ZNF416Q9BWM5 594 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms