RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 COPS3Q9UNS2 423 aa8.54□□□□□ -1.04
TPM4-216ENST00000592822 STARD10Q9Y365 291 aa8.54□□□□□ -1.04
TPM4-216ENST00000592822 OTOGQ6ZRI0 2925 aa8.54□□□□□ -1.04
TPM4-216ENST00000592822 MYO9AB2RTY4 2548 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 CSMD1Q96PZ7 3565 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 C5orf63A6NC05 138 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 B9A039 149 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 H0YJX3 145 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 M0R135 149 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 CLPTM1O96005 669 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 ZNF250P15622 560 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 CDKN1AP38936 164 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 MPV17P39210 176 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 CAPGP40121 348 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 MTNR1AP48039 350 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 PRKXP51817 358 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 AQP4P55087 323 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 TPTEP56180 551 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 ISL1P61371 349 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 IL5RAQ01344 420 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 POU4F2Q12837 409 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 IL18R1Q13478 541 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 DEFB113Q30KQ7 82 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 UNQ6126/PRO20091Q6UXV3 157 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 C1orf174Q8IYL3 243 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 SYNPRQ8TBG9 265 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 KLF14Q8TD94 323 aaPredicted RBP8.53□□□□□ -1.04
TPM4-216ENST00000592822 IPCEF1Q8WWN9 437 aaPredicted RBP8.53□□□□□ -1.04
TPM4-216ENST00000592822 TFAP2CQ92754 450 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 APOBEC3DQ96AK3 386 aaPredicted RBP8.53□□□□□ -1.04
TPM4-216ENST00000592822 RNFT2Q96EX2 444 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 ZNF799Q96GE5 643 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 SYT3Q9BQG1 590 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 C1QTNF5Q9BXJ0 243 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 CACNG6Q9BXT2 260 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 OR2J1Q9GZK6 312 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 ZNF701Q9NV72 531 aaPredicted RBP8.53□□□□□ -1.04
TPM4-216ENST00000592822 BEX4Q9NWD9 120 aaPredicted RBP8.53□□□□□ -1.04
TPM4-216ENST00000592822 CLN6Q9NWW5 311 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 SLCO1C1Q9NYB5 712 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 MYEF2Q9P2K5 600 aaKnown RBP8.53□□□□□ -1.04
TPM4-216ENST00000592822 DUSP13Q9UII6 198 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 LAMP5Q9UJQ1 280 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.53□□□□□ -1.04
TPM4-216ENST00000592822 ARID1AO14497 2285 aa8.53□□□□□ -1.04
TPM4-216ENST00000592822 IGLV3-9A0A075B6K5 115 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 H3BSA7 217 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 J3QRE1 110 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 J3QW42 95 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 PSMD9O00233 223 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 MAGEB4O15481 346 aaPredicted RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 IGHV3-13P01766 116 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 LCATP04180 440 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 H2BFMP0C1H6 154 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 SLC2A1P11166 492 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 DBTP11182 482 aaKnown RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 PAX1P15863 534 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 TUBG1P23258 451 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 SLC15A1P46059 708 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 SLC6A9P48067 706 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 PTH2RP49190 550 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 CX3CR1P49238 355 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 EVX1P49640 407 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 RGS6P49758 472 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 KLF3P57682 345 aaPredicted RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 SNRPD2P62316 118 aaKnown RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 GRB2P62993 217 aaKnown RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 ROM1Q03395 351 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 ZNF91Q05481 1191 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 HLXQ14774 488 aaPredicted RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 SMN1Q16637 294 aaKnown RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 SNAI3Q3KNW1 292 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 ZNF718Q3SXZ3 478 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 C6orf52Q5T4I8 152 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 MBNL2Q5VZF2 373 aaKnown RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 DRAM2Q6UX65 266 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 LRRN1Q6UXK5 716 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 USP51Q70EK9 711 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 SSX6Q7RTT6 188 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 PRSS45Q7RTY3 260 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 KRT77Q7Z794 578 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 SETD9Q8NE22 299 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 CNIH3Q8TBE1 160 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 ASB17Q8WXJ9 295 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 Q96MT0 163 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 OR8B4Q96RC9 309 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 MNTQ99583 582 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 TBX5Q99593 518 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 TTTY10Q9BZA0 68 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 GSX2Q9BZM3 304 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 VCX3BQ9H321 246 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 CXorf56Q9H5V9 222 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 AMBNQ9NP70 447 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 TUBG2Q9NRH3 451 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 PTTG3PQ9NZH4 202 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 EXOGQ9Y2C4 368 aaKnown RBP8.52□□□□□ -1.05
TPM4-216ENST00000592822 LRP12Q9Y561 859 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 TMEM14AQ9Y6G1 99 aa8.52□□□□□ -1.05
TPM4-216ENST00000592822 PRRC2AP48634 2157 aaKnown RBP8.51□□□□□ -1.05
TPM4-216ENST00000592822 A0A1W2PPW3 197 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms