RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 ARPC2O15144 300 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 ATP8B1O43520 1251 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 IDH3BO43837 385 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 ZNF205O95201 554 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 FSHBP01225 129 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 FABP3P05413 133 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 RRM2P31350 389 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 MDH2P40926 338 aaKnown RBP13.52□□□□□ -0.25
CIRBP-240ENST00000592815 SLC36A3Q495N2 470 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 SLC35F1Q5T1Q4 408 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 SLC18B1Q6NT16 456 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 PGAM4Q8N0Y7 254 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 BHLHE23Q8NDY6 225 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 DEFB108BQ8NET1 73 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 OR2AJ1Q8NGZ0 328 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 ZNF420Q8TAQ5 688 aaPredicted RBP13.52□□□□□ -0.25
CIRBP-240ENST00000592815 GNPDA2Q8TDQ7 276 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 MEGF10Q96KG7 1140 aa13.52□□□□□ -0.25
CIRBP-240ENST00000592815 RBM4Q9BWF3 364 aaKnown RBP13.52□□□□□ -0.25
CIRBP-240ENST00000592815 OR6C68A6NDL8 312 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 IFNL4K9M1U5 179 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 CYB5R3P00387 301 aaPredicted RBP13.51□□□□□ -0.25
CIRBP-240ENST00000592815 HLA-DQA2P01906 255 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 GSSP48637 474 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 SRP9P49458 86 aaKnown RBP13.51□□□□□ -0.25
CIRBP-240ENST00000592815 MMP16P51512 607 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 ZNF154Q13106 437 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 CFAP77Q6ZQR2 320 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 ZBTB46Q86UZ6 589 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 OR52E2Q8NGJ4 325 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 DVL3Q92997 716 aaPredicted RBP13.51□□□□□ -0.25
CIRBP-240ENST00000592815 SLC30A2Q9BRI3 323 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 HCAR1Q9BXC0 346 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 C1QTNF5Q9BXJ0 243 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 FN3KQ9H479 309 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 TMEM165Q9HC07 324 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 IL1RAPQ9NPH3 570 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 TMEM100Q9NV29 134 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 ARL8BQ9NVJ2 186 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 TAGLN3Q9UI15 199 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 POLR3KQ9Y2Y1 108 aaPredicted RBP13.51□□□□□ -0.25
CIRBP-240ENST00000592815 AUP1Q9Y679 476 aa13.51□□□□□ -0.25
CIRBP-240ENST00000592815 TMEM89A2RUT3 159 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 IQCF6A8MYZ5 107 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 F5H0A9 414 aaPredicted RBP13.5□□□□□ -0.25
CIRBP-240ENST00000592815 F5H5P2 479 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 LCATP04180 440 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 WNT2P09544 360 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 ACSM4P0C7M7 580 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 SELEP16581 610 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 ZNF12P17014 697 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 GGT2P36268 569 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 COMPP49747 757 aaPredicted RBP13.5□□□□□ -0.25
CIRBP-240ENST00000592815 PRSS12P56730 875 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.5□□□□□ -0.257e-8■■□□□ 13.6
CIRBP-240ENST00000592815 TSPAN31Q12999 210 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 ECH1Q13011 328 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 KRTAP27-1Q3LI81 207 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 ESCO2Q56NI9 601 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 CLEC12AQ5QGZ9 265 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 COLCA1Q6ZS62 124 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 NAA40Q86UY6 237 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 MOGAT3Q86VF5 341 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 ZDHHC21Q8IVQ6 265 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 MUC20Q8N307 709 aaPredicted RBP13.5□□□□□ -0.25
CIRBP-240ENST00000592815 C3orf56Q8N813 242 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 ZDHHC22Q8N966 263 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 SDR9C7Q8NEX9 313 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 POP5Q969H6 163 aaKnown RBP13.5□□□□□ -0.25
CIRBP-240ENST00000592815 ESM1Q9NQ30 184 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 CYB5R1Q9UHQ9 305 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 INSIG2Q9Y5U4 225 aa13.5□□□□□ -0.25
CIRBP-240ENST00000592815 CEACAM18A8MTB9 384 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 MLNRO43193 412 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 HLA-DPB1P04440 258 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 MXRA7P84157 204 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 TRAP1Q12931 704 aaKnown RBP13.49□□□□□ -0.25
CIRBP-240ENST00000592815 MALLQ13021 153 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 GK2Q14410 553 aaPredicted RBP13.49□□□□□ -0.25
CIRBP-240ENST00000592815 ARMCX4Q5H9R4 360 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 PGBD2Q6P3X8 592 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 C16orf89Q6UX73 402 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 RBMS3Q6XE24 437 aaKnown RBP13.49□□□□□ -0.25
CIRBP-240ENST00000592815 ZNF620Q6ZNG0 422 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 DEFB107AQ8IZN7 70 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 SIGLECL1Q8N7X8 197 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 SLCO4A1Q96BD0 722 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 ATF6BQ99941 703 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 MRI1Q9BV20 369 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 EGLN3Q9H6Z9 239 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 NTN4Q9HB63 628 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 DDX28Q9NUL7 540 aaKnown RBP13.49□□□□□ -0.25
CIRBP-240ENST00000592815 MRPL22Q9NWU5 206 aaKnown RBP13.49□□□□□ -0.25
CIRBP-240ENST00000592815 OR5V1Q9UGF6 321 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 NUP50Q9UKX7 468 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 ARL2BPQ9Y2Y0 163 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 PPIAL4AQ9Y536 164 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 TANC2Q9HCD6 1990 aa13.49□□□□□ -0.25
CIRBP-240ENST00000592815 LRRC30A6NM36 301 aa13.48□□□□□ -0.25
CIRBP-240ENST00000592815 A8MXK9 166 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms