RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 TUBG1P23258 451 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 ANOS1P23352 680 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 FASP25445 335 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 IL2RGP31785 369 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 MRPS11P82912 194 aaKnown RBP13.36□□□□□ -0.27
LIG3-215ENST00000592690 ECH1Q13011 328 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 PCK2Q16822 640 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 SPRNQ5BIV9 151 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 C6orf52Q5T4I8 152 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 PLBD1Q6P4A8 553 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 DCXRQ7Z4W1 244 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 AMIGO2Q86SJ2 522 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 LRTOMTQ8WZ04 291 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 COG8Q96MW5 612 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 SOX7Q9BT81 388 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 SLC25A19Q9HC21 320 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 TUBG2Q9NRH3 451 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 CYSLTR2Q9NS75 346 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 DECR2Q9NUI1 292 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 CGGBP1Q9UFW8 167 aaPredicted RBP13.36□□□□□ -0.27
LIG3-215ENST00000592690 CACNG2Q9Y698 323 aa13.36□□□□□ -0.27
LIG3-215ENST00000592690 NAV3Q8IVL0 2385 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 ZNF593O00488 134 aaPredicted RBP13.35□□□□□ -0.27
LIG3-215ENST00000592690 TLX2O43763 284 aaPredicted RBP13.35□□□□□ -0.27
LIG3-215ENST00000592690 MITFO75030 526 aaPredicted RBP13.35□□□□□ -0.27
LIG3-215ENST00000592690 ADH4P08319 380 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 TACSTD2P09758 323 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 PAICSP22234 425 aaKnown RBP13.35□□□□□ -0.27
LIG3-215ENST00000592690 LIPAP38571 399 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 GPR6P46095 362 aaPredicted RBP13.35□□□□□ -0.27
LIG3-215ENST00000592690 CRISP1P54107 249 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 PRSS12P56730 875 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 PPP2R2BQ00005 443 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 FAM209AQ5JX71 171 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 Q6ZR03 302 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 COLCA1Q6ZS62 124 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 USP51Q70EK9 711 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 ERI1Q8IV48 349 aaKnown RBP13.35□□□□□ -0.27
LIG3-215ENST00000592690 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 ST7LQ8TDW4 575 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 DNAJC9Q8WXX5 260 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 HAVCR1Q96D42 359 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 C1QTNF5Q9BXJ0 243 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 OR51V1Q9H2C8 321 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 SAP30LQ9HAJ7 183 aa13.35□□□□□ -0.27
LIG3-215ENST00000592690 DDX28Q9NUL7 540 aaKnown RBP13.35□□□□□ -0.27
LIG3-215ENST00000592690 IGHV1-69-2A0A0G2JMI3 117 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 PRR23D1E9PI22 279 aaPredicted RBP13.34□□□□□ -0.27
LIG3-215ENST00000592690 G3V2T6 193 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 M0R135 149 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 WNT9BO14905 357 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 PPIHO43447 177 aaKnown RBP13.34□□□□□ -0.27
LIG3-215ENST00000592690 GLCEO94923 617 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 HMGN1P05114 100 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 PRR23D2P0DMB1 279 aaPredicted RBP13.34□□□□□ -0.27
LIG3-215ENST00000592690 RAC2P15153 192 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 GSTT1P30711 240 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 OTX1P32242 354 aaPredicted RBP13.34□□□□□ -0.27
LIG3-215ENST00000592690 CRYBB2P43320 205 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 GZMKP49863 264 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 CHN2P52757 468 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 BLVRAP53004 296 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 HNRNPA0Q13151 305 aaKnown RBP13.34□□□□□ -0.27
LIG3-215ENST00000592690 ZMAT1Q5H9K5 638 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 TEX30Q5JUR7 227 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 CYB5R2Q6BCY4 276 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 OR2T2Q6IF00 324 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 FBXW12Q6X9E4 464 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 SPATC1Q76KD6 591 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 HIPK1Q86Z02 1210 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 CPOQ8IVL8 374 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 OR5AS1Q8N127 324 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 PARP8Q8N3A8 854 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 BBS1Q8NFJ9 593 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 OR6N2Q8NGY6 317 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 PYDC1Q8WXC3 89 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 SLAMF6Q96DU3 332 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 ZMYND19Q96E35 227 aaPredicted RBP13.34□□□□□ -0.27
LIG3-215ENST00000592690 ZNF799Q96GE5 643 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 INTS14Q96SY0 518 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 GABARAPL1Q9H0R8 117 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 NARFLQ9H6Q4 476 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 MARCH7Q9H992 704 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 ZDHHC8Q9ULC8 765 aa13.34□□□□□ -0.27
LIG3-215ENST00000592690 C5orf63A6NC05 138 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 A8MV72 311 aaPredicted RBP13.33□□□□□ -0.28
LIG3-215ENST00000592690 LCATP04180 440 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 FCGR1AP12314 374 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 EPHA2P29317 976 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 RBMXP38159 391 aaKnown RBP13.33□□□□□ -0.28
LIG3-215ENST00000592690 SLC6A9P48067 706 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 TPTEP56180 551 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 CDK5R2Q13319 367 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 EIF2B1Q14232 305 aaKnown RBP13.33□□□□□ -0.28
LIG3-215ENST00000592690 KPNB1Q14974 876 aaKnown RBP13.33□□□□□ -0.28
LIG3-215ENST00000592690 PTGES3Q15185 160 aaKnown RBP13.33□□□□□ -0.28
LIG3-215ENST00000592690 SNAI3Q3KNW1 292 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 KLHL12Q53G59 568 aa13.33□□□□□ -0.28
LIG3-215ENST00000592690 AVPI1Q5T686 147 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms