RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 RAB39BQ96DA2 213 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 LRGUKQ96M69 825 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 PITX2Q99697 317 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 THTPAQ9BU02 230 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 CDADC1Q9BWV3 514 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 TSSK6Q9BXA6 273 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 C1orf21Q9H246 121 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 PNRC2Q9NPJ4 139 aaKnown RBP11.74□□□□□ -0.53
APOC1-208ENST00000592535 CYB5R1Q9UHQ9 305 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 TRAV20A0A0B4J274 112 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 ISPDA4D126 451 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 TVP23AA6NH52 213 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 ACOT8O14734 319 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 PLPP2O43688 288 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 ACSM4P0C7M7 580 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 RAP2AP10114 183 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 TNFSF4P23510 183 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 RPS27P42677 84 aaKnown RBP11.73□□□□□ -0.53
APOC1-208ENST00000592535 KRTAP24-1Q3LI83 254 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 COLCA1Q6ZS62 124 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 NAA40Q86UY6 237 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 ADGRG5Q8IZF4 528 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 LNX2Q8N448 690 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 PROKR2Q8NFJ6 384 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 OR51L1Q8NGJ5 315 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 OR9Q1Q8NGQ5 310 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 OR2T4Q8NH00 348 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 MAP6Q96JE9 813 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 ATF6BQ99941 703 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 GAL3ST1Q99999 423 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 DGCR6LQ9BY27 220 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 WDR76Q9H967 626 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 TMEM106BQ9NUM4 274 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 ARMC1Q9NVT9 282 aa11.73□□□□□ -0.53
APOC1-208ENST00000592535 WNK2Q9Y3S1 2297 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 F5H5K5 113 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 PSKH1P11801 424 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 ANPEPP15144 967 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 ZNF823P16415 610 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 TNFRSF1AP19438 455 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 PRSS12P56730 875 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
APOC1-208ENST00000592535 ECH1Q13011 328 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 CRMP1Q14194 572 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 TRPM8Q7Z2W7 1104 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 PEG10Q86TG7 708 aaKnown RBP11.72□□□□□ -0.53
APOC1-208ENST00000592535 ATG16L2Q8NAA4 619 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 OR8G5Q8NG78 346 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 OR10G2Q8NGC3 310 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 OR10S1Q8NGN2 331 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 POP5Q969H6 163 aaKnown RBP11.72□□□□□ -0.53
APOC1-208ENST00000592535 OR2V2Q96R30 315 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 NIPSNAP1Q9BPW8 284 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 RBM4Q9BWF3 364 aaKnown RBP11.72□□□□□ -0.53
APOC1-208ENST00000592535 CHID1Q9BWS9 393 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 C1QTNF5Q9BXJ0 243 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 G6PC2Q9NQR9 355 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 UBAP1Q9NZ09 502 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 IL19Q9UHD0 177 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 KCNG2Q9UJ96 466 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 NPTNQ9Y639 398 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 MXRA5Q9NR99 2828 aa11.72□□□□□ -0.53
APOC1-208ENST00000592535 IQCF6A8MYZ5 107 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 H0YL77 283 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 CST1P01037 141 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 IGHV2-70P01814 119 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 LCATP04180 440 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 GYPBP06028 91 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 SBK2P0C263 348 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 CLUP10909 449 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 FAHD2BQ6P2I3 314 aaPredicted RBP11.71□□□□□ -0.53
APOC1-208ENST00000592535 ZNF283Q8N7M2 679 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 BHLHE23Q8NDY6 225 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 OR2T33Q8NG76 320 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 OR10AD1Q8NGE0 317 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 GIPC3Q8TF64 312 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 CANT1Q8WVQ1 401 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 FAHD2AQ96GK7 314 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.53
APOC1-208ENST00000592535 SIGLEC11Q96RL6 698 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 NMNAT2Q9BZQ4 307 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 BAIAP2Q9UQB8 552 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 COMMD3-BMI1R4GMX3 469 aa11.71□□□□□ -0.53
APOC1-208ENST00000592535 AQP12BA6NM10 295 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 M0R135 149 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 SURF4O15260 269 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 MLNRO43193 412 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 PNPP00491 289 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 AVPP01185 164 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 SPARCP09486 303 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 SPI1P17947 270 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 ANOS1P23352 680 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 MMP16P51512 607 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 TPTEP56180 551 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 GK2Q14410 553 aaPredicted RBP11.7□□□□□ -0.54
APOC1-208ENST00000592535 SHQ1Q6PI26 577 aaKnown RBP11.7□□□□□ -0.54
APOC1-208ENST00000592535 CD300LDQ6UXZ3 194 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 C1orf229Q6ZS94 237 aaPredicted RBP11.7□□□□□ -0.54
APOC1-208ENST00000592535 TMEM179BQ7Z7N9 219 aa11.7□□□□□ -0.54
APOC1-208ENST00000592535 AQP12AQ8IXF9 295 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms