RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ACTG1P63261 375 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 TNFAIP6P98066 277 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-207ENST00000591519 SCRN3Q0VDG4 424 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 PGM2L1Q6PCE3 622 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 Q6ZR03 302 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 CCDC121Q6ZUS5 278 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 C3orf56Q8N813 242 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 ZDHHC22Q8N966 263 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 SGMS2Q8NHU3 365 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 FANK1Q8TC84 345 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 ST7LQ8TDW4 575 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 CANT1Q8WVQ1 401 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 PTP4A1Q93096 173 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 RASD2Q96D21 266 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 ZMYND19Q96E35 227 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-207ENST00000591519 COG8Q96MW5 612 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-207ENST00000591519 CHID1Q9BWS9 393 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 MAGIXQ9H6Y5 334 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 ESM1Q9NQ30 184 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 TMEM106BQ9NUM4 274 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 GRHPRQ9UBQ7 328 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 IL19Q9UHD0 177 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 PURGQ9UJV8 347 aaKnown RBP8.77□□□□□ -1.01
VPS4B-207ENST00000591519 POMPQ9Y244 141 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 SAMHD1Q9Y3Z3 626 aaKnown RBP8.77□□□□□ -1.01
VPS4B-207ENST00000591519 LYVE1Q9Y5Y7 322 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 TEX13CA0A0J9YWL9 993 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 A0A1W2PPL8 197 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 PRSS37A4D1T9 235 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 J3QW42 95 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 SOCS2O14508 198 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 GNGT2O14610 69 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 SGCEO43556 437 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 TIMM8AO60220 97 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-207ENST00000591519 ATP5HO75947 161 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 CCNB2O95067 398 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 PPP1R3DO95685 299 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 CST1P01037 141 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 SBK2P0C263 348 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 RAP2AP10114 183 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 TNFSF4P23510 183 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 MAGEA2P43356 314 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 RASSF2P50749 326 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 LCN2P80188 198 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 KCNMB1Q16558 191 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 OR2T5Q6IEZ7 315 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 PGBD2Q6P3X8 592 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 BPIFB2Q8N4F0 458 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 SPICQ8N5J4 248 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 DEFB108BQ8NET1 73 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 OR4C15Q8NGM1 316 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 OR2T29Q8NH02 315 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 GNPDA2Q8TDQ7 276 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 POP5Q969H6 163 aaKnown RBP8.76□□□□□ -1.01
VPS4B-207ENST00000591519 CMBLQ96DG6 245 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 Q96M85 177 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 ZNF570Q96NI8 536 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 SIGLEC11Q96RL6 698 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 SLC6A7Q99884 636 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 NDEL1Q9GZM8 345 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 RERGLQ9H628 205 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 REEP1Q9H902 201 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 PATZ1Q9HBE1 687 aaKnown RBP8.76□□□□□ -1.01
VPS4B-207ENST00000591519 EMC7Q9NPA0 242 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 NRIP3Q9NQ35 241 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 MMP26Q9NRE1 261 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 DCAF16Q9NXF7 216 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 SIGLEC7Q9Y286 467 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 STARD10Q9Y365 291 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 IER3IP1Q9Y5U9 82 aa8.76□□□□□ -1.01
VPS4B-207ENST00000591519 ISPDA4D126 451 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 OR6C6A6NF89 314 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 AQP12BA6NM10 295 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 A8MXK9 166 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 F5H0A9 414 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-207ENST00000591519 TRAPPC2LH3BP13 241 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 IFNL4K9M1U5 179 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 XKRYO14609 159 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 IMPA2O14732 288 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 SURF4O15260 269 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 SPRY1O43609 319 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-207ENST00000591519 DOK2O60496 412 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 KRT36O76013 467 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 NDUFB2O95178 105 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 FSTL3O95633 263 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 RAC2P15153 192 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 CTLA4P16410 223 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 ZNF12P17014 697 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 IFNGR2P38484 337 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 FXYD6P3P58550 94 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 DBPQ10586 325 aaPredicted RBP8.75□□□□□ -1.01
VPS4B-207ENST00000591519 ZNF154Q13106 437 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 AQP6Q13520 282 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 MESTQ5EB52 335 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 C1orf146Q5VVC0 180 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 OTPQ5XKR4 325 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 GPR139Q6DWJ6 353 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 SMARCD3Q6STE5 483 aa8.75□□□□□ -1.01
VPS4B-207ENST00000591519 DOK3Q7L591 496 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms