RNA–Protein interactions for RNA: ENST00000590477.5

ATP9B-222, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 2

Gene ATP9B, Length 1,784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-222	ENST00000590477	LIN7B	Q9HAP6	207 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	TMEM165	Q9HC07	324 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	STEAP1	Q9UHE8	339 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	DMXL1	Q9Y485	3027 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	TRGV5	A0A0B4J1U4	118 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	ZNF724	A8MTY0	619 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	RER1	O15258	196 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	SYT7	O43581	403 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	KRT33A	O76009	404 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	CST2	P09228	141 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	NKX2-5	P52952	324 aa	Predicted RBP	13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	HIST1H3A	P68431	136 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	HES5	Q5TA89	166 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	HIST2H3PS2	Q5TEC6	136 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	HIST2H3A	Q71DI3	136 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	ZNF283	Q8N7M2	679 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	NKAIN3	Q8N8D7	197 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	LGALS14	Q8TCE9	139 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	LINC00470	Q9BZP3	86 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	CRLF2	Q9HC73	371 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	PNRC2	Q9NPJ4	139 aa	Known RBP	13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	CEP250	Q9BV73	2442 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	FREM2	Q5SZK8	3169 aa		13.4	□□□□□ -0.26
ATP9B-222	ENST00000590477	TRAV8-7	A0A075B6U6	113 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477		A0A0G2JMP0	313 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477		A0A0X1KG70	313 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	HMX3	A6NHT5	357 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	TPPP	O94811	219 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	TTR	P02766	147 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	ACSM4	P0C7M7	580 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	CPN1	P15169	458 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	ADRA2C	P18825	462 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	CX3CR1	P49238	355 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	PCBD1	P61457	104 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	IFITM2	Q01629	132 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	SCRN3	Q0VDG4	424 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	ECH1	Q13011	328 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	ENDOG	Q14249	297 aa	Known RBP	13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	NDUFA5	Q16718	116 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	ELFN2	Q5R3F8	820 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	MZT2B	Q6NZ67	158 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	SERPINA12	Q8IW75	414 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	MCEMP1	Q8IX19	187 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	CCDC54	Q8NEL0	328 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	OR4M2	Q8NGB6	313 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	ABHD3	Q8WU67	409 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	SPTSSA	Q969W0	71 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	HDHD2	Q9H0R4	259 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	SLCO5A1	Q9H2Y9	848 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	ZDHHC11	Q9H8X9	412 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	TMEM38B	Q9NVV0	291 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	CAMK2A	Q9UQM7	478 aa		13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.39	□□□□□ -0.27
ATP9B-222	ENST00000590477	LINC00854	A0A1B0GVQ3	168 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	MEIOC	A2RUB1	952 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477		H3BSH0	61 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	P2RY10	O00398	339 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	CEACAM4	O75871	244 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	FARS2	O95363	451 aa	Known RBP	13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	IGFBP3	P17936	291 aa	Predicted RBP	13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	DEFB109B	Q30KR1	87 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	FAM122A	Q96E09	287 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	S100A16	Q96FQ6	103 aa	Known RBP	13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	ST6GAL2	Q96JF0	529 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	FOXB1	Q99853	325 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	ABCG5	Q9H222	651 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	BCO1	Q9HAY6	547 aa		13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.38	□□□□□ -0.27
ATP9B-222	ENST00000590477	TFEC	O14948	347 aa	Predicted RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	PLA2G10	O15496	165 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	FCGR2A	P12318	317 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	PRKX	P51817	358 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	ART1	P52961	327 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	ZNF121	P58317	390 aa	Predicted RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	SRSF6	Q13247	344 aa	Known RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	CCDC92	Q53HC0	331 aa	Predicted RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	LRRC18	Q8N456	261 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	OR5D14	Q8NGL3	314 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	CAPSL	Q8WWF8	208 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	RFT1	Q96AA3	541 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	ZNF775	Q96BV0	537 aa	Predicted RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	GPR35	Q9HC97	309 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	GP6	Q9HCN6	339 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	PLEK2	Q9NYT0	353 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	RBMX2	Q9Y388	322 aa	Known RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	N6AMT1	Q9Y5N5	214 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	CNOT1	A5YKK6	2376 aa	Known RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477		A0A1B0GVC2	190 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477		A6NIN4	97 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	SLC17A2	O00624	439 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	CTDSPL	O15194	276 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	ERCC1	P07992	297 aa	Predicted RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	WT1	P19544	449 aa	Predicted RBP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	MMP15	P51511	669 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	RAB35	Q15286	201 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	RAB11B	Q15907	218 aa		13.37	□□□□□ -0.27
ATP9B-222	ENST00000590477	DOK3	Q7L591	496 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms