RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 DAZAP2Q15038 168 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-211ENST00000589753 ARL9Q6T311 187 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 TMPRSS11AQ6ZMR5 421 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 EGFL6Q8IUX8 553 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 SYS1Q8N2H4 156 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 KLHL36Q8N4N3 616 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 PIK3IP1Q96FE7 263 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 C4orf36Q96KX1 117 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 C4orf45Q96LM5 186 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 NR1H4Q96RI1 486 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-211ENST00000589753 SIGLEC11Q96RL6 698 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 EIF3KQ9UBQ5 218 aaKnown RBP13.14□□□□□ -0.31
ATG4D-211ENST00000589753 ERGIC3Q9Y282 383 aa13.14□□□□□ -0.31
ATG4D-211ENST00000589753 CAB39Q9Y376 341 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-211ENST00000589753 USP9XQ93008 2570 aaPredicted RBP13.13□□□□□ -0.31
ATG4D-211ENST00000589753 TMEM129A0AVI4 362 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 MYL12BO14950 172 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 RPP14O95059 124 aaKnown RBP13.13□□□□□ -0.31
ATG4D-211ENST00000589753 ABHD16AO95870 558 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 CD3EP07766 207 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 HTR1AP08908 422 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 PCSK6P29122 969 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 HGFACQ04756 655 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 IRF3Q14653 427 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 ZNF829Q3KNS6 432 aaPredicted RBP13.13□□□□□ -0.31
ATG4D-211ENST00000589753 OR2G6Q5TZ20 316 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 DRAM2Q6UX65 266 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 OR52N1Q8NH53 320 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 SPRYD4Q8WW59 207 aaPredicted RBP13.13□□□□□ -0.31
ATG4D-211ENST00000589753 RADILQ96JH8 1075 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 DOK1Q99704 481 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 ISG20L2Q9H9L3 353 aaKnown RBP13.13□□□□□ -0.31
ATG4D-211ENST00000589753 ACOXLQ9NUZ1 547 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 SPEF1Q9Y4P9 236 aa13.13□□□□□ -0.31
ATG4D-211ENST00000589753 TMEM269A0A1B0GVZ9 245 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 TRIM64A6NGJ6 449 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 A6NNC1 897 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 ATP6V1G2-DDX39BF2Z307 99 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 ICMTO60725 284 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 GOSR1O95249 250 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 MT-ND5P03915 603 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 ANXA2P07355 339 aaKnown RBP13.12□□□□□ -0.31
ATG4D-211ENST00000589753 LOXP28300 417 aaPredicted RBP13.12□□□□□ -0.31
ATG4D-211ENST00000589753 WNT5AP41221 380 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 RGS6P49758 472 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 CDH15P55291 814 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
ATG4D-211ENST00000589753 PSMA6P60900 246 aaKnown RBP13.12□□□□□ -0.31
ATG4D-211ENST00000589753 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 NAA40Q86UY6 237 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 NANOGP1Q8N7R0 232 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 MND1Q9BWT6 205 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 ZNF696Q9H7X3 374 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 SP140LQ9H930 580 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 BRD7Q9NPI1 651 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 PLEKHB1Q9UF11 243 aaPredicted RBP13.12□□□□□ -0.31
ATG4D-211ENST00000589753 RNF115Q9Y4L5 304 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 SNX5Q9Y5X3 404 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 R4GMQ9 66 aa13.12□□□□□ -0.31
ATG4D-211ENST00000589753 SMPD2O60906 423 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 SRSF10O75494 262 aaKnown RBP13.11□□□□□ -0.31
ATG4D-211ENST00000589753 LCATP04180 440 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 FAM157BP0CG42 384 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 SLC2A1P11166 492 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 NR4A1P22736 598 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 PSMB10P40306 273 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 RAD52P43351 418 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 MMP16P51512 607 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 GBX2P52951 348 aaPredicted RBP13.11□□□□□ -0.31
ATG4D-211ENST00000589753 UCP2P55851 309 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 WNT4P56705 351 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 MRPL28Q13084 256 aaKnown RBP13.11□□□□□ -0.31
ATG4D-211ENST00000589753 ADAM5Q6NVV9 412 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 ZNF773Q6PK81 442 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 UNQ6126/PRO20091Q6UXV3 157 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 ZNF101Q8IZC7 436 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 ABHD4Q8TB40 342 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 HAVCR2Q8TDQ0 301 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 RORBQ92753 470 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 APOBEC3DQ96AK3 386 aaPredicted RBP13.11□□□□□ -0.31
ATG4D-211ENST00000589753 PELI1Q96FA3 418 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 C1QTNF5Q9BXJ0 243 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 BCL2L14Q9BZR8 327 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 OR51B6Q9H340 312 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 FAM206AQ9NX38 181 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
ATG4D-211ENST00000589753 SPTBN1Q01082 2364 aaKnown RBP13.1□□□□□ -0.31
ATG4D-211ENST00000589753 TENM4Q6N022 2769 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 ACOD1A6NK06 481 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 SHISA9B4DS77 424 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 LOC110117498-PIK3R3F6TDL0 507 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 J3QW42 95 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 PNPP00491 289 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 NGFP01138 241 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 COL8A1P27658 744 aa13.1□□□□□ -0.31
ATG4D-211ENST00000589753 MAP2K4P45985 399 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms