RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	KLHDC2	Q9Y2U9	406 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	LOC400499	M0QZD8	3231 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	PTPRZ1	P23471	2315 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	TVP23A	A6NH52	213 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318		A6NIZ1	184 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	AQP7P3	A6NL99	342 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ZNF593	O00488	134 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	TRAF3IP2	O43734	574 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	RAB13	P51153	203 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	RAP1B	P61224	184 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	RAP1A	P62834	184 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	GK2	Q14410	553 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	TP53I3	Q53FA7	332 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ZNF684	Q5T5D7	378 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	TMEM17	Q86X19	198 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	CDC20B	Q86Y33	519 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	SYS1	Q8N2H4	156 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ZNF454	Q8N9F8	522 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ASB13	Q8WXK3	278 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ST8SIA2	Q92186	375 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	WDR76	Q9H967	626 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	TRIM36	Q9NQ86	728 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	KLHL13	Q9P2N7	655 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	AKAP13	Q12802	2813 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318		A0A0J9YW62	118 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	MCRIP1	C9JLW8	97 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	SLC16A7	O60669	478 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	NCR1	O76036	304 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	RGS11	O94810	467 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	HRG	P04196	525 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	AKR1D1	P51857	326 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	SLC35A1	P78382	337 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	IGSF11	Q5DX21	431 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	ELFN2	Q5R3F8	820 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	RPTN	Q6XPR3	784 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	SIAH3	Q8IW03	269 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	MDS2	Q8NDY4	140 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	THAP4	Q8WY91	577 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	PELI1	Q96FA3	418 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	FAM173A	Q9BQD7	235 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	ST6GALNAC2	Q9UJ37	374 aa		13.69	□□□□□ -0.22
DDX39A-209	ENST00000589318	IGKV1D-43	A0A0B4J1Z2	117 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	LOC102725191	A0A1B0GVB3	256 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	PLPP2	O43688	288 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	ECD	O95905	644 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	EIF4E	P06730	217 aa	Known RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	ACTA2	P62736	377 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	ACTG2	P63267	376 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	FMOD	Q06828	376 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	SNTB2	Q13425	540 aa	Known RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	HLX	Q14774	488 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	TOMM20	Q15388	145 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	ZNF600	Q6ZNG1	722 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	CCDC36	Q8IYA8	594 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	SAMD12	Q8N8I0	201 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	OR14L1P	Q8NHC6	308 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	NSMAF	Q92636	917 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	RNF166	Q96A37	237 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	CMTM3	Q96MX0	182 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	EMC6	Q9BV81	110 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	TMED9	Q9BVK6	235 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	MFRP	Q9BY79	579 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	MRPL13	Q9BYD1	178 aa	Known RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	NKX6-2	Q9C056	277 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	C20orf85	Q9H1P6	137 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	MRPL22	Q9NWU5	206 aa	Known RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	BOK	Q9UMX3	212 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	CFAP47	Q6ZTR5	3102 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	DCHS1	Q96JQ0	3298 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	NUPL2	O15504	423 aa	Known RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	OR2A4	O95047	310 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	PLAT	P00750	562 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	APOC3	P02656	99 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	ALDOB	P05062	364 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	CXCL2	P19875	107 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	RPS27	P42677	84 aa	Known RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	RRAD	P55042	308 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	BID	P55957	195 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	INSL4	Q14641	139 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	OTP	Q5XKR4	325 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	DMKN	Q6E0U4	476 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	C17orf107	Q6ZR85	190 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	GGN	Q86UU5	652 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	SULF2	Q8IWU5	870 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	UEVLD	Q8IX04	471 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	OR5M9	Q8NGP3	310 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	COQ8A	Q8NI60	647 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	ORAI1	Q96D31	301 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	MRPS24	Q96EL2	167 aa	Known RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	PGLYRP3	Q96LB9	341 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	FOXN4	Q96NZ1	517 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	OXGR1	Q96P68	337 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	OR2A7	Q96R45	310 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	INTS14	Q96SY0	518 aa		13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX39A-209	ENST00000589318	GPN1	Q9HCN4	374 aa	Predicted RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms