RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 OR7E24Q6IFN5 339 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 C3orf33Q6P1S2 294 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 PLBD1Q6P4A8 553 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 RPL22L1Q6P5R6 122 aaKnown RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 UNQ9370/PRO34162Q6UXP9 181 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 APOOLQ6UXV4 268 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 NHLRC1Q6VVB1 395 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 IL34Q6ZMJ4 242 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ZNF600Q6ZNG1 722 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 Q6ZS46 218 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 SLC36A1Q7Z2H8 476 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 FAM122BQ7Z309 247 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 RANBP3LQ86VV4 465 aaPredicted RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 LDLRAD3Q86YD5 345 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 TRAPPC5Q8IUR0 188 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 CPOQ8IVL8 374 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 CFAP206Q8IYR0 622 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 CMTM4Q8IZR5 234 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 PUSL1Q8N0Z8 303 aaKnown RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 C17orf47Q8NEP4 570 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 BPIFCQ8NFQ6 507 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 OR10H4Q8NGA5 316 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 OR5M8Q8NGP6 311 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 OR5M1Q8NGP8 315 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 OR9A1PQ8NGU1 263 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 OR52I2Q8NH67 350 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 STOML3Q8TAV4 291 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 GLYATL2Q8WU03 294 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 TNFAIP8L1Q8WVP5 186 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 HAS2Q92819 552 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 VOPP1Q96AW1 172 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 INTS12Q96CB8 462 aaKnown RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 TM4SF18Q96CE8 201 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 CNN2Q99439 309 aaKnown RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 AIF1LQ9BQI0 150 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 WFDC6Q9BQY6 131 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 TEX101Q9BY14 249 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 HES7Q9BYE0 225 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 POTEKPQ9BYX7 375 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 MFFQ9GZY8 342 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 PCBD2Q9H0N5 130 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 SLITRK2Q9H156 845 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ALX4Q9H161 411 aaPredicted RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 OR51M1Q9H341 326 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 OR52D1Q9H346 318 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 UBQLN3Q9H347 655 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 CHODLQ9H9P2 273 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ADGRL4Q9HBW9 690 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ZNF160Q9HCG1 818 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 NKIRAS2Q9NYR9 191 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 TAS2R3Q9NYW6 316 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 TRPC4Q9UBN4 977 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ZNF107Q9UII5 783 aaPredicted RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 ZNF223Q9UK11 482 aaPredicted RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 TNFSF18Q9UNG2 199 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 FLVCR2Q9UPI3 526 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 FOXJ3Q9UPW0 622 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 SH2B3Q9UQQ2 575 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ZNF443Q9Y2A4 671 aaPredicted RBP3.7□□□□□ -1.82
LIG3-211ENST00000588713 SLC35A3Q9Y2D2 325 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 DTX4Q9Y2E6 619 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 HERC2O95714 4834 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ARID1AO14497 2285 aa3.7□□□□□ -1.82
LIG3-211ENST00000588713 ABCA1O95477 2261 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 TRAV14DV4A0A0A6YYC5 116 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 A0A0A6YYD5 115 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 KIR2DS5A0A0G2JLQ3 304 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 A0A0G2JNG1 304 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 A0A0G2JNJ9 132 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 TMEM272A0A1B0GTI8 110 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 A0A1B0GVC2 190 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GXYLT2A0PJZ3 443 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 TMEM218A2RU14 115 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 OR5H15A6NDH6 313 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 A6NIN4 97 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 CPSF4LA6NMK7 179 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 HSPB2A8KAH6 182 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 LINC00587B1AMM8 73 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 E9PI62 339 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 BLOC1S5-TXNDC5H3BN57 136 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 H7C417 338 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 KIR2DS3K7RE56 304 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GPR31O00270 319 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SAP18O00422 153 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 PIN1P1O15428 100 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 FGF16O43320 207 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SGCEO43556 437 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 PIP5K1CO60331 668 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 CTNSO60931 367 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 SH3BGRLO75368 114 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 POP7O75817 140 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 GLSO94925 669 aaPredicted RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 POP4O95707 220 aaKnown RBP3.69□□□□□ -1.82
LIG3-211ENST00000588713 PMS2P2O95744 297 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 CH25HO95992 272 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 IGF2P01344 180 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 GBAP04062 536 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 RPN2P04844 631 aa3.69□□□□□ -1.82
LIG3-211ENST00000588713 ACAA1P09110 424 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms