RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TMUB1Q9BVT8 246 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 TUBG2Q9NRH3 451 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 CENPMQ9NSP4 180 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 ZNF878C9JN71 531 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 M0R135 149 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 DLGAP1O14490 977 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 NAT2P11245 290 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 ANOS1P23352 680 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 NUDT6P53370 316 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 TPTEP56180 551 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 PSG7Q13046 419 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 GGTLC2Q14390 218 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 LCN1P1Q5VSP4 162 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 SPATC1Q76KD6 591 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 SLC16A9Q7RTY1 509 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 GTF3AQ92664 365 aaKnown RBP17.27■□□□□ 0.36
DDX39A-207ENST00000588542 SPTSSAQ969W0 71 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 ZNF799Q96GE5 643 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 COG8Q96MW5 612 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 RAB1BQ9H0U4 201 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 TPK1Q9H3S4 243 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 MS4A5Q9H3V2 200 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 SLCO1C1Q9NYB5 712 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 KLHDC2Q9Y2U9 406 aa17.27■□□□□ 0.36
DDX39A-207ENST00000588542 CR1P17927 2039 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 ZANQ9Y493 2812 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 TEP1Q99973 2627 aaKnown RBP17.26■□□□□ 0.35
DDX39A-207ENST00000588542 TRIM64A6NGJ6 449 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 TRIM64BA6NI03 449 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 MMP15P51511 669 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 HCCSP53701 268 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 CDC42P60953 191 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 NKPD1Q17RQ9 610 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 LPCAT4Q643R3 524 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 ZNF525Q8N782 197 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 ZNF454Q8N9F8 522 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 OR8J1Q8NGP2 316 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 FAM81AQ8TBF8 368 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 CMBLQ96DG6 245 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 KCNJ15Q99712 375 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 COPS4Q9BT78 406 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 YIPF3Q9GZM5 350 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 DLL4Q9NR61 685 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 PTTG3PQ9NZH4 202 aa17.26■□□□□ 0.35
DDX39A-207ENST00000588542 H2AFY2Q9P0M6 372 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-207ENST00000588542 SLC22A31A6NKX4 558 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 LYNP07948 512 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 MRPL3P09001 348 aaKnown RBP17.25■□□□□ 0.35
DDX39A-207ENST00000588542 ALOX5APP20292 161 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 OPRL1P41146 370 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 PRKXP51817 358 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 TNK1Q13470 666 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 HLXQ14774 488 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-207ENST00000588542 TRIP10Q15642 601 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 FBXW12Q6X9E4 464 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 RHOUQ7L0Q8 258 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 GID4Q8IVV7 300 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 OR5L1Q8NGL2 311 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 THEM6Q8WUY1 208 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 NEU4Q8WWR8 484 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-207ENST00000588542 HAVCR1Q96D42 359 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 ZNF582Q96NG8 517 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-207ENST00000588542 HAO2Q9NYQ3 351 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 GPR160Q9UJ42 338 aa17.25■□□□□ 0.35
DDX39A-207ENST00000588542 C5orf63A6NC05 138 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 C17orf100A8MU93 164 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 LCATP04180 440 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 KITLGP21583 273 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 PEX2P28328 305 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 GRB2P62993 217 aaKnown RBP17.24■□□□□ 0.35
DDX39A-207ENST00000588542 TAF13Q15543 124 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 MOGQ16653 247 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 LRRC36Q1X8D7 754 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 DRAM2Q6UX65 266 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 CIARTQ8N365 385 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-207ENST00000588542 TRUB1Q8WWH5 349 aaKnown RBP17.24■□□□□ 0.35
DDX39A-207ENST00000588542 ADGRL4Q9HBW9 690 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 FAM118AQ9NWS6 357 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 DNAJC27Q9NZQ0 273 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 PURGQ9UJV8 347 aaKnown RBP17.24■□□□□ 0.35
DDX39A-207ENST00000588542 COPS3Q9UNS2 423 aa17.24■□□□□ 0.35
DDX39A-207ENST00000588542 YLPM1P49750 1951 aaKnown RBP17.24■□□□□ 0.35
DDX39A-207ENST00000588542 CASQ2O14958 399 aaPredicted RBP17.23■□□□□ 0.35
DDX39A-207ENST00000588542 CD99P14209 185 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 RAC2P15153 192 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 HTR1FP30939 366 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 SLC15A1P46059 708 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 SLC6A9P48067 706 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 SNRPGP62308 76 aaKnown RBP17.23■□□□□ 0.35
DDX39A-207ENST00000588542 SNAI3Q3KNW1 292 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 LURAP1LQ8IV03 231 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 GALNT4Q8N4A0 578 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 SNX33Q8WV41 574 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 CNN2Q99439 309 aaKnown RBP17.23■□□□□ 0.35
DDX39A-207ENST00000588542 DCLRE1BQ9H816 532 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 IMPAD1Q9NX62 359 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 LAMP5Q9UJQ1 280 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 GMPPBQ9Y5P6 360 aa17.23■□□□□ 0.35
DDX39A-207ENST00000588542 TANC2Q9HCD6 1990 aa17.22■□□□□ 0.35
DDX39A-207ENST00000588542 IGHV4-30-2A0A087WSY4 118 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms