RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PTCHD4Q6ZW05 846 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 BHLHE23Q8NDY6 225 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 OR13G1Q8NGZ3 307 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 CCT8L2Q96SF2 557 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 GPX7Q96SL4 187 aaPredicted RBP11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 SIRPDQ9H106 197 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 SYT4Q9H2B2 425 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 WDR76Q9H967 626 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 VSX1Q9NZR4 365 aaPredicted RBP11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 GMPR2Q9P2T1 348 aaKnown RBP11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 EFCAB9A8MZ26 197 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 FAM220BPB1ANY3 271 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 DCTN6O00399 190 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 ENSAO43768 121 aaKnown RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 PTBP3O95758 552 aaKnown RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 IGHV4-59P01825 116 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 CD200P41217 278 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 GUCA1AP43080 201 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 YAP1P46937 504 aaKnown RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 SLC9A3P48764 834 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 SELENOWP63302 87 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 DBPQ10586 325 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 KRR1Q13601 381 aaKnown RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 MPPED2Q15777 294 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 LRRC23Q53EV4 343 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 GPR157Q5UAW9 335 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 ERICH5Q6P6B1 374 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 TMPRSS11FQ6ZWK6 438 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 NLRC3Q7RTR2 1065 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 VTCN1Q7Z7D3 282 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 LDLRAD3Q86YD5 345 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 C1QL4Q86Z23 238 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 SSMEM1Q8WWF3 244 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 ACOT11Q8WXI4 607 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 DYRK2Q92630 601 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 ZDHHC16Q969W1 377 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 APOBEC3DQ96AK3 386 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 ZNF582Q96NG8 517 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 ZNF570Q96NI8 536 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 PCGF1Q9BSM1 259 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 NRIP3Q9NQ35 241 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 TMCC3Q9ULS5 477 aa11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 COA3Q9Y2R0 106 aaPredicted RBP11.42□□□□□ -0.58
CLPTM1-208ENST00000588274 SLC22A31A6NKX4 558 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 ZNF879B4DU55 563 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 TIMM23O14925 209 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 GPR137BO60478 399 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 SLC16A7O60669 478 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 FAM20BO75063 409 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 GK2Q14410 553 aaPredicted RBP11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 MEP1BQ16820 701 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 COQ5Q5HYK3 327 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 PRAMEF6Q5VXH4 476 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 ZNF620Q6ZNG0 422 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 MBOAT2Q6ZWT7 520 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 GLB1L2Q8IW92 636 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 PIP4P2Q8N4L2 257 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 CELF2-AS1Q8N7Q2 184 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 FAM71F1Q96KD3 344 aaPredicted RBP11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 COQ7Q99807 217 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 NUAK2Q9H093 628 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 NMNAT1Q9HAN9 279 aaPredicted RBP11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 PNRC2Q9NPJ4 139 aaKnown RBP11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 GRHPRQ9UBQ7 328 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 SIGLEC7Q9Y286 467 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
CLPTM1-208ENST00000588274 IGLV1-36A0A0B4J1U3 117 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 IGHV1-69DA0A0B4J2H0 117 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 A0A0U1RQK1 487 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 P2RY10O00398 339 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 EDF1O60869 148 aaKnown RBP11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 PTP4A3O75365 173 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 IGHV1-69P01742 117 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 ACSM4P0C7M7 580 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 FPR3P25089 353 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 SDHAP31040 664 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 IER3P46695 156 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 COX10Q12887 443 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 CYLC2Q14093 348 aaPredicted RBP11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 TRAM2Q15035 370 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 PDCD1Q15116 288 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 TAF9Q16594 264 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 ZBED5Q49AG3 693 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 CFAP77Q6ZQR2 320 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 Q6ZSV7 163 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 RNF113BQ8IZP6 322 aaKnown RBP11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 C1orf87Q8N0U7 546 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 ZSCAN4Q8NAM6 433 aaPredicted RBP11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 TPD52L3Q96J77 140 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 ATP6V1G3Q96LB4 118 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 MAGEB18Q96M61 343 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 WDFY2Q96P53 400 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 TSSK2Q96PF2 358 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 ECSITQ9BQ95 431 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 HDHD2Q9H0R4 259 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 ACOXLQ9NUZ1 547 aa11.4□□□□□ -0.58
CLPTM1-208ENST00000588274 LRRC30A6NM36 301 aa11.39□□□□□ -0.59
CLPTM1-208ENST00000588274 XKRYO14609 159 aa11.39□□□□□ -0.59
CLPTM1-208ENST00000588274 KHDRBS3O75525 346 aaKnown RBP11.39□□□□□ -0.59
CLPTM1-208ENST00000588274 PPP1R3DO95685 299 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms