RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 SPATC1Q76KD6 591 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 ARPINQ7Z6K5 226 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 C19orf18Q8NEA5 215 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 GJC3Q8NFK1 279 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 OR8B3Q8NGG8 313 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 OR10S1Q8NGN2 331 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
ERCC1-205ENST00000587888 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 TMIGD2Q96BF3 282 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 UPRTQ96BW1 309 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 RSRC1Q96IZ7 334 aaKnown RBP11.83□□□□□ -0.52
ERCC1-205ENST00000587888 OR8B2Q96RD0 313 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 SLC30A2Q9BRI3 323 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 NUDT16L1Q9BRJ7 211 aaKnown RBP11.83□□□□□ -0.52
ERCC1-205ENST00000587888 AURKCQ9UQB9 309 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 FAM32AQ9Y421 112 aaKnown RBP11.83□□□□□ -0.52
ERCC1-205ENST00000587888 LHFPL6Q9Y693 200 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 ENPP4Q9Y6X5 453 aa11.83□□□□□ -0.52
ERCC1-205ENST00000587888 KIR2DS1A0A191URI9 304 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 IQCF6A8MYZ5 107 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 F5H5K5 113 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 CLDN34H7C241 214 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 J3QW42 95 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 DCTN6O00399 190 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 HOXA3O43365 443 aaPredicted RBP11.82□□□□□ -0.52
ERCC1-205ENST00000587888 PLATP00750 562 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 PPIAL4GP0DN37 164 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 COX4I1P13073 169 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 IRF2P14316 349 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 CPT2P23786 658 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 OMPP47874 163 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 PITPNBP48739 271 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 GSK3BP49841 420 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 FXYD6P3P58550 94 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 DEFA6Q01524 100 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 RSPO1Q2MKA7 263 aaPredicted RBP11.82□□□□□ -0.52
ERCC1-205ENST00000587888 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 ZNF404Q494X3 552 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 DPY19L2P2Q6ZN68 376 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 C9orf139Q6ZV77 190 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 NLRC3Q7RTR2 1065 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 ADCK1Q86TW2 530 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 NAA40Q86UY6 237 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 C1orf87Q8N0U7 546 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 OR52J3Q8NH60 311 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 ERMAPQ96PL5 475 aaPredicted RBP11.82□□□□□ -0.52
ERCC1-205ENST00000587888 COQ7Q99807 217 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 HCAR1Q9BXC0 346 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 ANKRD19PQ9H560 264 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 ARGLU1Q9NWB6 273 aaPredicted RBP11.82□□□□□ -0.52
ERCC1-205ENST00000587888 B9D1Q9UPM9 204 aa11.82□□□□□ -0.52
ERCC1-205ENST00000587888 TRBV4-1A0A0J9YWV2 114 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 A0A1W2PRQ8 180 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 SASH3O75995 380 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 DIRAS1O95057 198 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 PPP1R3DO95685 299 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 CRABP1P29762 137 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 FGF12P61328 243 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 HIST1H3AP68431 136 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 DGCR6Q14129 220 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 SEC23BQ15437 767 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 HIST2H3PS2Q5TEC6 136 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 DNM1P34Q6PK57 102 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 HIST2H3AQ71DI3 136 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 LINC00346Q8IVM7 164 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 GPX7Q96SL4 187 aaPredicted RBP11.81□□□□□ -0.52
ERCC1-205ENST00000587888 PITX2Q99697 317 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 HOPXQ9BPY8 73 aaPredicted RBP11.81□□□□□ -0.52
ERCC1-205ENST00000587888 KCTD14Q9BQ13 255 aaPredicted RBP11.81□□□□□ -0.52
ERCC1-205ENST00000587888 CDADC1Q9BWV3 514 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 HDHD2Q9H0R4 259 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 UFSP2Q9NUQ7 469 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 NDUFAF4Q9P032 175 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 CLN8Q9UBY8 286 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 ATPIF1Q9UII2 106 aa11.81□□□□□ -0.52
ERCC1-205ENST00000587888 SLC22A2O15244 555 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 TXNDC12O95881 172 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 LCATP04180 440 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 CRYBA1P05813 215 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 MDH1P40925 334 aaKnown RBP11.8□□□□□ -0.52
ERCC1-205ENST00000587888 HOXA4Q00056 320 aaPredicted RBP11.8□□□□□ -0.52
ERCC1-205ENST00000587888 SRSF4Q08170 494 aaKnown RBP11.8□□□□□ -0.52
ERCC1-205ENST00000587888 MAB21L1Q13394 359 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 GK2Q14410 553 aaPredicted RBP11.8□□□□□ -0.52
ERCC1-205ENST00000587888 ZNF181Q2M3W8 571 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 PRAMEF6Q5VXH4 476 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 SMARCD3Q6STE5 483 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 OR6V1Q8N148 313 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 FITM2Q8N6M3 262 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 KIR3DL3Q8N743 410 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 BOLLQ8N9W6 283 aaKnown RBP11.8□□□□□ -0.52
ERCC1-205ENST00000587888 OR11L1Q8NGX0 322 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 OR2AJ1Q8NGZ0 328 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 DACT3Q96B18 629 aaPredicted RBP11.8□□□□□ -0.52
ERCC1-205ENST00000587888 SLCO4A1Q96BD0 722 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 NMNAT3Q96T66 252 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 PCGF1Q9BSM1 259 aa11.8□□□□□ -0.52
ERCC1-205ENST00000587888 SLITRK2Q9H156 845 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms