RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PTCHD4Q6ZW05 846 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 VTCN1Q7Z7D3 282 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 Q8TCH9 128 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 COG8Q96MW5 612 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 ZNF582Q96NG8 517 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-225ENST00000586385 ECSITQ9BQ95 431 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 PCGF1Q9BSM1 259 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 SYT4Q9H2B2 425 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 SMURF1Q9HCE7 757 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 GRHPRQ9UBQ7 328 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 ATPIF1Q9UII2 106 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 TMCC3Q9ULS5 477 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 LHFPL6Q9Y693 200 aa9.85□□□□□ -0.83
BRCA1-225ENST00000586385 DCTN6O00399 190 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 ENSAO43768 121 aaKnown RBP9.84□□□□□ -0.83
BRCA1-225ENST00000586385 AHCYL1O43865 530 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 GPR137BO60478 399 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 SLC16A7O60669 478 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 PTP4A3O75365 173 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 IGHV4-59P01825 116 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 CRYBA1P05813 215 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 RGS6P49758 472 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 BPIFB3P59826 476 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 SELENOWP63302 87 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 KRR1Q13601 381 aaKnown RBP9.84□□□□□ -0.83
BRCA1-225ENST00000586385 CYLC2Q14093 348 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-225ENST00000586385 MEP1BQ16820 701 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 ANKDD1AQ495B1 522 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 GPR157Q5UAW9 335 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 PRAMEF6Q5VXH4 476 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 ZNF620Q6ZNG0 422 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 TMPRSS11FQ6ZWK6 438 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 NLRC3Q7RTR2 1065 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 ACOT11Q8WXI4 607 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-225ENST00000586385 APOBEC3DQ96AK3 386 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-225ENST00000586385 TPD52L3Q96J77 140 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 ZNF570Q96NI8 536 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 SIRPDQ9H106 197 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 VSX1Q9NZR4 365 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-225ENST00000586385 RNF114Q9Y508 228 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 POMT1Q9Y6A1 747 aa9.84□□□□□ -0.83
BRCA1-225ENST00000586385 SLC22A31A6NKX4 558 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 FAM220BPB1ANY3 271 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 ZNF879B4DU55 563 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 TIMM23O14925 209 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 KHDRBS3O75525 346 aaKnown RBP9.83□□□□□ -0.84
BRCA1-225ENST00000586385 FPR3P25089 353 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 RPL4P36578 427 aaKnown RBP9.83□□□□□ -0.84
BRCA1-225ENST00000586385 CD200P41217 278 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 CDKN2AP42771 156 aaKnown RBP9.83□□□□□ -0.84
BRCA1-225ENST00000586385 GK2Q14410 553 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-225ENST00000586385 TRAM2Q15035 370 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 ZBED5Q49AG3 693 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 ERICH5Q6P6B1 374 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 CORO6Q6QEF8 472 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 MBOAT2Q6ZWT7 520 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 NAA40Q86UY6 237 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 GLB1L2Q8IW92 636 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 SSMEM1Q8WWF3 244 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 DYRK2Q92630 601 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 FAM71F1Q96KD3 344 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-225ENST00000586385 MAGEB18Q96M61 343 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 TSSK2Q96PF2 358 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 COQ7Q99807 217 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 FNDC11Q9BVV2 318 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 NUAK2Q9H093 628 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 NMNAT1Q9HAN9 279 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-225ENST00000586385 NRIP3Q9NQ35 241 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 TMEM100Q9NV29 134 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 SIGLEC7Q9Y286 467 aa9.83□□□□□ -0.84
BRCA1-225ENST00000586385 IGLV1-36A0A0B4J1U3 117 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 IGHV1-69DA0A0B4J2H0 117 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 A0A0U1RQK1 487 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 C5orf63A6NC05 138 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 LRRC30A6NM36 301 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 P2RY10O00398 339 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 XKRYO14609 159 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 MRASO14807 208 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 TOX4O94842 621 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 PTBP3O95758 552 aaKnown RBP9.82□□□□□ -0.84
BRCA1-225ENST00000586385 IFNA14P01570 189 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 IGHV1-69P01742 117 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 ACSM4P0C7M7 580 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 SDHAP31040 664 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 IER3P46695 156 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 RPL15P61313 204 aaKnown RBP9.82□□□□□ -0.84
BRCA1-225ENST00000586385 TAF9Q16594 264 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 ZNF730Q6ZMV8 503 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 CFAP77Q6ZQR2 320 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 Q6ZSV7 163 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 LDLRAD3Q86YD5 345 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 RNF113BQ8IZP6 322 aaKnown RBP9.82□□□□□ -0.84
BRCA1-225ENST00000586385 C1orf87Q8N0U7 546 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 FGFRL1Q8N441 504 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 PIP4P2Q8N4L2 257 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 CELF2-AS1Q8N7Q2 184 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 OR5L1Q8NGL2 311 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 ATP6V1G3Q96LB4 118 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 WDFY2Q96P53 400 aa9.82□□□□□ -0.84
BRCA1-225ENST00000586385 TECTBQ96PL2 329 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms