RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ACHEP22303 614 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 SLC2A5P22732 501 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 LOXL1Q08397 574 aaPredicted RBP11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 MALLQ13021 153 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 TMED1Q13445 227 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 TNK1Q13470 666 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 SNCBQ16143 134 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 LRRC36Q1X8D7 754 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 ZIK1Q3SY52 487 aaPredicted RBP11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 PLBD1Q6P4A8 553 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 CORO6Q6QEF8 472 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 ZBTB49Q6ZSB9 765 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 DCXRQ7Z4W1 244 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 CPOQ8IVL8 374 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 LINC00346Q8IVM7 164 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 TIGD4Q8IY51 512 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 BBS1Q8NFJ9 593 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 TMEM163Q8TC26 289 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 C10orf105Q8TEF2 133 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 UBASH3BQ8TF42 649 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 TRUB1Q8WWH5 349 aaKnown RBP11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 RDH5Q92781 318 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 OTULINQ96BN8 352 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 MAP6Q96JE9 813 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 RDH12Q96NR8 316 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 COPS4Q9BT78 406 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 REG4Q9BYZ8 158 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 EGLN1Q9GZT9 426 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 OR51V1Q9H2C8 321 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 OR51B6Q9H340 312 aa11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 H2AFY2Q9P0M6 372 aaPredicted RBP11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 NKX1-2Q9UD57 310 aaPredicted RBP11.82□□□□□ -0.52
PRKCSH-202ENST00000585540 TVP23AA6NH52 213 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 H0YHG0 523 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 XRCC2O43543 280 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 PRKYO43930 277 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 TIMM8AO60220 97 aaPredicted RBP11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 NGFP01138 241 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 CD55P08174 381 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 PSKH1P11801 424 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 DAOP14920 347 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 TNFSF4P23510 183 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 CFL1P23528 166 aaKnown RBP11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 GIFP27352 417 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 ALDH3B1P43353 468 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF81P51508 661 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 MMP15P51511 669 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 CDC42P60953 191 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 ERVS71-1P61550 626 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 RPS7P62081 194 aaKnown RBP11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 POU4F2Q12837 409 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 EIF2B1Q14232 305 aaKnown RBP11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 GGTLC2Q14390 218 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 TAF13Q15543 124 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 KLHL12Q53G59 568 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 DEGS2Q6QHC5 323 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 ERI1Q8IV48 349 aaKnown RBP11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF525Q8N782 197 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 OR8J1Q8NGP2 316 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 OTOSQ8NHW6 89 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 ST7LQ8TDW4 575 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 RNF133Q8WVZ7 376 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 HAVCR1Q96D42 359 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 SLAMF6Q96DU3 332 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 MBOAT4Q96T53 435 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 YIPF3Q9GZM5 350 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 SLC22A4Q9H015 551 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 DCLRE1BQ9H816 532 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 WDR76Q9H967 626 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 CHODLQ9H9P2 273 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 HAO2Q9NYQ3 351 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF391Q9UJN7 358 aa11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 PURGQ9UJV8 347 aaKnown RBP11.81□□□□□ -0.52
PRKCSH-202ENST00000585540 RTTNQ86VV8 2226 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 ITPR3Q14573 2671 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 TRIM64A6NGJ6 449 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 TRIM64BA6NI03 449 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 SNTNA6NMZ2 147 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 IQCF6A8MYZ5 107 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 IFNL4K9M1U5 179 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 CASQ2O14958 399 aaPredicted RBP11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 CLPTM1O96005 669 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 LYNP07948 512 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 HSD11B1P28845 292 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 DCTDP32321 178 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 TMEM33P57088 247 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 SLC3A1Q07837 685 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 PSG7Q13046 419 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 KCTD18Q6PI47 426 aaPredicted RBP11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 SLC16A9Q7RTY1 509 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 DPY19L4Q7Z388 723 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 BCDIN3DQ7Z5W3 292 aaKnown RBP11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 LRP11Q86VZ4 500 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 GALNT4Q8N4A0 578 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 ZNF511Q8NB15 262 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 ASB17Q8WXJ9 295 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 RFKQ969G6 155 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 ELMOD3Q96FG2 381 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 RGCCQ9H4X1 137 aa11.8□□□□□ -0.52
PRKCSH-202ENST00000585540 DECR2Q9NUI1 292 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms