RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PGAM4Q8N0Y7 254 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 BCL6BQ8N143 479 aaPredicted RBP12.58□□□□□ -0.4
VAPA-209ENST00000585042 CELF2-AS1Q8N7Q2 184 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 RAB40AQ8WXH6 277 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 ERGIC1Q969X5 290 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 FAM162AQ96A26 154 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 NSL1Q96IY1 281 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 MEGF10Q96KG7 1140 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 C1orf147Q96MC9 270 aaPredicted RBP12.58□□□□□ -0.4
VAPA-209ENST00000585042 SLC30A2Q9BRI3 323 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 SLITRK2Q9H156 845 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 SYT4Q9H2B2 425 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 RPS6KA6Q9UK32 745 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 FAM32AQ9Y421 112 aaKnown RBP12.58□□□□□ -0.4
VAPA-209ENST00000585042 KIR2DS1A0A191URI9 304 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 IQCF6A8MYZ5 107 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 RER1O15258 196 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 PLATP00750 562 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 H1F0P07305 194 aaKnown RBP12.57□□□□□ -0.4
VAPA-209ENST00000585042 GATA4P43694 442 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 RPS6KA3P51812 740 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 GNB2P62879 340 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 SPATS1Q496A3 300 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 C1orf94Q6P1W5 598 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 DNM1P34Q6PK57 102 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 KLBQ86Z14 1044 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 SLC7A6Q92536 515 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 DACT3Q96B18 629 aaPredicted RBP12.57□□□□□ -0.4
VAPA-209ENST00000585042 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
VAPA-209ENST00000585042 HSH2DQ96JZ2 352 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 ZNF48Q96MX3 618 aaPredicted RBP12.57□□□□□ -0.4
VAPA-209ENST00000585042 NUAK2Q9H093 628 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 PRDM13Q9H4Q3 707 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 KRCC1Q9NPI7 259 aaPredicted RBP12.57□□□□□ -0.4
VAPA-209ENST00000585042 TMEM100Q9NV29 134 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 ARL8BQ9NVJ2 186 aa12.57□□□□□ -0.4
VAPA-209ENST00000585042 IGHV2-70DA0A0C4DH43 119 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 IMPA2O14732 288 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 SERPINA1P01009 418 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 RPS2P15880 293 aaKnown RBP12.56□□□□□ -0.4
VAPA-209ENST00000585042 RHCEP18577 417 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 OMPP47874 163 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 COX10Q12887 443 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 ECH1Q13011 328 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 HLXQ14774 488 aaPredicted RBP12.56□□□□□ -0.4
VAPA-209ENST00000585042 SLC9A3R2Q15599 337 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 ZNF404Q494X3 552 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 OR2T2Q6IF00 324 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 LEG1Q6P5S2 330 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 C16orf87Q6PH81 154 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 NLRC3Q7RTR2 1065 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 TSEN54Q7Z6J9 526 aaKnown RBP12.56□□□□□ -0.4
VAPA-209ENST00000585042 OR5AS1Q8N127 324 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 PARP8Q8N3A8 854 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 FITM2Q8N6M3 262 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 BCAS4Q8TDM0 211 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 FAM46AQ96IP4 442 aaKnown RBP12.56□□□□□ -0.4
VAPA-209ENST00000585042 CDRT15Q96T59 188 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 TMEM246Q9BRR3 403 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 HCAR1Q9BXC0 346 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 UNKLQ9H9P5 680 aaKnown RBP12.56□□□□□ -0.4
VAPA-209ENST00000585042 PTTG3PQ9NZH4 202 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 IER3IP1Q9Y5U9 82 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 DOCK11Q5JSL3 2073 aa12.56□□□□□ -0.4
VAPA-209ENST00000585042 A0A1B0GUS0 222 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 B2RBV5 119 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 DBHP09172 617 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 HSD17B1P14061 328 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 CALB2P22676 271 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 CDKN2AP42771 156 aaKnown RBP12.55□□□□□ -0.4
VAPA-209ENST00000585042 ERFP50548 548 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 OCLNQ16625 522 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 KRTAP27-1Q3LI81 207 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 GLYATQ6IB77 296 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 PTCHD4Q6ZW05 846 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 OR8B3Q8NGG8 313 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 Q8TCH9 128 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 OR8B2Q96RD0 313 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 RERGLQ9H628 205 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 NDUFAF4Q9P032 175 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 MAGEL2Q9UJ55 1249 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 SAMD4AQ9UPU9 718 aaKnown RBP12.55□□□□□ -0.4
VAPA-209ENST00000585042 AURKCQ9UQB9 309 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 POLR1DQ9Y2S0 133 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 LHFPL6Q9Y693 200 aa12.55□□□□□ -0.4
VAPA-209ENST00000585042 UNC119BA6NIH7 251 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 SOCS2O14508 198 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 ARPC3O15145 178 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 MLNRO43193 412 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 CYB5R3P00387 301 aaPredicted RBP12.54□□□□□ -0.4
VAPA-209ENST00000585042 IRF2P14316 349 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 FPR3P25089 353 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 NPY4RP50391 375 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 SMIM11AP58511 58 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 HNRNPA0Q13151 305 aaKnown RBP12.54□□□□□ -0.4
VAPA-209ENST00000585042 RSPO1Q2MKA7 263 aaPredicted RBP12.54□□□□□ -0.4
VAPA-209ENST00000585042 SLC36A3Q495N2 470 aa12.54□□□□□ -0.4
VAPA-209ENST00000585042 ZNF362Q5T0B9 420 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms