RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SERPINA1P01009 418 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 F13BP05160 661 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 TNFRSF1AP19438 455 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 ATP6AP1Q15904 470 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 SGCAQ16586 387 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 LRRC36Q1X8D7 754 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 PTOV1Q86YD1 416 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 RBM45Q8IUH3 476 aaKnown RBP15.02■□□□□ -0
TOP3A-220ENST00000585031 C1orf174Q8IYL3 243 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 MUC20Q8N307 709 aaPredicted RBP15.02■□□□□ -0
TOP3A-220ENST00000585031 ZSCAN4Q8NAM6 433 aaPredicted RBP15.02■□□□□ -0
TOP3A-220ENST00000585031 MRAPQ8TCY5 172 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 DYRK2Q92630 601 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 FAM71F1Q96KD3 344 aaPredicted RBP15.02■□□□□ -0
TOP3A-220ENST00000585031 C4orf45Q96LM5 186 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 TBX15Q96SF7 602 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 Q9H521 79 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 TMEM38AQ9H6F2 299 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 NANSQ9NR45 359 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 IL19Q9UHD0 177 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 ANGPT4Q9Y264 503 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 V9GYQ6 96 aa15.02■□□□□ -0
TOP3A-220ENST00000585031 IGHV3-64DA0A0J9YX35 117 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 CENPVL3A0A0U1RRI6 287 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 H0YJX3 145 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 M0R3H8 397 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 KPNA4O00629 521 aaPredicted RBP15.01□□□□□ -0.01
TOP3A-220ENST00000585031 IFNA14P01570 189 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 OPN1MWP04001 364 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 OPN1MW2P0DN77 364 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 OPN1MW3P0DN78 364 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 KDELR2P33947 212 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 UGT2B15P54855 530 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 PCBP3P57721 371 aaKnown RBP15.01□□□□□ -0.01
TOP3A-220ENST00000585031 LRRC23Q53EV4 343 aaPredicted RBP15.01□□□□□ -0.01
TOP3A-220ENST00000585031 ZMAT1Q5H9K5 638 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 SWT1Q5T5J6 900 aaKnown RBP15.01□□□□□ -0.01
TOP3A-220ENST00000585031 GPR157Q5UAW9 335 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 ZNF841Q6ZN19 808 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 AMIGO2Q86SJ2 522 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 PACRGLQ8N7B6 248 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 OR4D11Q8NGI4 311 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 SSMEM1Q8WWF3 244 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 NSMAFQ92636 917 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 NEIL1Q96FI4 390 aaPredicted RBP15.01□□□□□ -0.01
TOP3A-220ENST00000585031 PYURFQ96I23 114 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 MCHR1Q99705 422 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 C9orf16Q9BUW7 83 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 CHID1Q9BWS9 393 aa15.01□□□□□ -0.01
TOP3A-220ENST00000585031 BLOC1S5-TXNDC5H3BN57 136 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 CHP2O43745 196 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 SCG5P05408 212 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 CSF1P09603 554 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 MMP9P14780 707 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 KITLGP21583 273 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 CPT2P23786 658 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 LAP3P28838 519 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 AQP1P29972 269 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 PMELP40967 661 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 HOXA4Q00056 320 aaPredicted RBP15□□□□□ -0.01
TOP3A-220ENST00000585031 CDK6Q00534 326 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 RPL18Q07020 188 aaKnown RBP15□□□□□ -0.01
TOP3A-220ENST00000585031 REEP3Q6NUK4 255 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 SLC25A47Q6Q0C1 308 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 RANBP3LQ86VV4 465 aaPredicted RBP15□□□□□ -0.01
TOP3A-220ENST00000585031 CLDN22Q8N7P3 220 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 HDAC2Q92769 488 aaKnown RBP15□□□□□ -0.01
TOP3A-220ENST00000585031 CMBLQ96DG6 245 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 PCGF1Q9BSM1 259 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 SEMA6AQ9H2E6 1030 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 KCNN2Q9H2S1 579 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 MEPEQ9NQ76 525 aaPredicted RBP15□□□□□ -0.01
TOP3A-220ENST00000585031 MIOXQ9UGB7 285 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 ZNF229Q9UJW7 825 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 STARD10Q9Y365 291 aa15□□□□□ -0.01
TOP3A-220ENST00000585031 CPSF4LA6NMK7 179 aaKnown RBP14.99□□□□□ -0.01
TOP3A-220ENST00000585031 ZNF682O95780 498 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 TNFSF4P23510 183 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 CFHR2P36980 270 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 IER3P46695 156 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 SCARB2Q14108 478 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 ZNF404Q494X3 552 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 ARMC4Q5T2S8 1044 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 FAM27BQ5VT28 67 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 WDR25Q64LD2 544 aaPredicted RBP14.99□□□□□ -0.01
TOP3A-220ENST00000585031 ZNF613Q6PF04 617 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 SMYD1Q8NB12 490 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 OR6T1Q8NGN1 323 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 C16orf95Q9H693 158 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 ELOVL3Q9HB03 270 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 MAN2C1Q9NTJ4 1040 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 BAG5Q9UL15 447 aa14.99□□□□□ -0.01
TOP3A-220ENST00000585031 PITPNBP48739 271 aa14.98□□□□□ -0.01
TOP3A-220ENST00000585031 ENDOGQ14249 297 aaKnown RBP14.98□□□□□ -0.01
TOP3A-220ENST00000585031 ENTPD8Q5MY95 495 aa14.98□□□□□ -0.01
TOP3A-220ENST00000585031 UNQ6126/PRO20091Q6UXV3 157 aa14.98□□□□□ -0.01
TOP3A-220ENST00000585031 ZBTB49Q6ZSB9 765 aa14.98□□□□□ -0.01
TOP3A-220ENST00000585031 CBLL1Q75N03 491 aa14.98□□□□□ -0.01
TOP3A-220ENST00000585031 CCDC80Q76M96 950 aa14.98□□□□□ -0.01
TOP3A-220ENST00000585031 PATL1Q86TB9 770 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms