RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 HIST1H3AP68431 136 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 EFNB1P98172 346 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 HGFACQ04756 655 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 MED21Q13503 144 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 GGTLC2Q14390 218 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF718Q3SXZ3 478 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 KLHL22Q53GT1 634 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 C6orf52Q5T4I8 152 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 HIST2H3PS2Q5TEC6 136 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF691Q5VV52 312 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 HIST2H3AQ71DI3 136 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 FAM220AQ7Z4H9 259 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 RHOXF1Q8NHV9 184 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 SNX33Q8WV41 574 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 SLC7A6Q92536 515 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF799Q96GE5 643 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 MAP6Q96JE9 813 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF75AQ96N20 296 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 TBX5Q99593 518 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 LIME1Q9H400 295 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF442Q9H7R0 627 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 DYNLRB1Q9NP97 96 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 HAO2Q9NYQ3 351 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 ST6GALNAC2Q9UJ37 374 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 HSPE1-MOB4S4R3N1 261 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 HRNRQ86YZ3 2850 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-215ENST00000584944 PLSCR5A0PG75 271 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 DAPL1A0PJW8 107 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 APOL3O95236 402 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 CLIC3O95833 236 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 KRT8P05787 483 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 ANXA2P07355 339 aaKnown RBP11.96□□□□□ -0.49
TRAF4-215ENST00000584944 SBK2P0C263 348 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 OR2T7P0C7T2 308 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 TUBG1P23258 451 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 TTKP33981 857 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 PRKXP51817 358 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 KLF3P57682 345 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-215ENST00000584944 CXCR4P61073 352 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 ADARB1P78563 741 aaKnown RBP11.96□□□□□ -0.49
TRAF4-215ENST00000584944 PCK2Q16822 640 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 NKPD1Q17RQ9 610 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 SPATA46Q5T0L3 261 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 PAMR1Q6UXH9 720 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 RHOUQ7L0Q8 258 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 TGIF2LYQ8IUE0 185 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 PAQR4Q8N4S7 273 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-215ENST00000584944 OR2T27Q8NH04 317 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 SYNPRQ8TBG9 265 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 RNF133Q8WVZ7 376 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 KCNJ15Q99712 375 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 NIPAL2Q9H841 368 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 ADGRL4Q9HBW9 690 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 TUBG2Q9NRH3 451 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 TBCCD1Q9NVR7 557 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 GTF2A1LQ9UNN4 478 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 PLEKHA6Q9Y2H5 1048 aa11.96□□□□□ -0.49
TRAF4-215ENST00000584944 B9A039 149 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 J3QW42 95 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 TBX1O43435 398 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 GPRIN2O60269 458 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 SMPD2O60906 423 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 DBHP09172 617 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 CX3CR1P49238 355 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 RIDAP52758 137 aaKnown RBP11.95□□□□□ -0.5
TRAF4-215ENST00000584944 HCCSP53701 268 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 MAD2L1BPQ15013 274 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-215ENST00000584944 ZNF829Q3KNS6 432 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-215ENST00000584944 ZNF322Q6U7Q0 402 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-215ENST00000584944 DRAM2Q6UX65 266 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 LRRN1Q6UXK5 716 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 THAP5Q7Z6K1 395 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 LILRB1Q8NHL6 650 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-215ENST00000584944 CNIH3Q8TBE1 160 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 ST7LQ8TDW4 575 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 TFAP2CQ92754 450 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 TRMT61AQ96FX7 289 aaKnown RBP11.95□□□□□ -0.5
TRAF4-215ENST00000584944 SYT3Q9BQG1 590 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 TTTY10Q9BZA0 68 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 RASSF4Q9H2L5 321 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 AMBNQ9NP70 447 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 BRD7Q9NPI1 651 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 DDX28Q9NUL7 540 aaKnown RBP11.95□□□□□ -0.5
TRAF4-215ENST00000584944 CHCHD3Q9NX63 227 aaKnown RBP11.95□□□□□ -0.5
TRAF4-215ENST00000584944 SLCO1C1Q9NYB5 712 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
TRAF4-215ENST00000584944 A0A1W2PPR1 153 aa11.94□□□□□ -0.5
TRAF4-215ENST00000584944 DLGAP1O14490 977 aa11.94□□□□□ -0.5
TRAF4-215ENST00000584944 TIMM8AO60220 97 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-215ENST00000584944 ZNF254O75437 659 aa11.94□□□□□ -0.5
TRAF4-215ENST00000584944 ATE1O95260 518 aa11.94□□□□□ -0.5
TRAF4-215ENST00000584944 TACSTD2P09758 323 aa11.94□□□□□ -0.5
TRAF4-215ENST00000584944 DBTP11182 482 aaKnown RBP11.94□□□□□ -0.5
TRAF4-215ENST00000584944 MYL12AP19105 171 aa11.94□□□□□ -0.5
TRAF4-215ENST00000584944 ALOX5APP20292 161 aa11.94□□□□□ -0.5
TRAF4-215ENST00000584944 WNT5AP41221 380 aa11.94□□□□□ -0.5
TRAF4-215ENST00000584944 NKX6-1P78426 367 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-215ENST00000584944 ZNF91Q05481 1191 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms