RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	PURG	Q9UJV8	347 aa	Known RBP	11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	ZDHHC8	Q9ULC8	765 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	CACNG2	Q9Y698	323 aa		11.3	□□□□□ -0.6
SREBF1-223	ENST00000584760	PPIH	O43447	177 aa	Known RBP	11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	GYPB	P06028	91 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	CD55	P08174	381 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	ACSM4	P0C7M7	580 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	CLU	P10909	449 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	SPI1	P17947	270 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	RPS27	P42677	84 aa	Known RBP	11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	CDH15	P55291	814 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	CBX1	P83916	185 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	ECH1	Q13011	328 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	CDK5R2	Q13319	367 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	FBXW12	Q6X9E4	464 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760		Q6ZR03	302 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	COLCA1	Q6ZS62	124 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	IQCF1	Q8N6M8	205 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	OR51L1	Q8NGJ5	315 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	OR10S1	Q8NGN2	331 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	CLDND2	Q8NHS1	167 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	TEX47	Q8TBZ9	253 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	HAVCR1	Q96D42	359 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	ELMOD3	Q96FG2	381 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	PITX2	Q99697	317 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	CMC2	Q9NRP2	79 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	DECR2	Q9NUI1	292 aa		11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	DDX28	Q9NUL7	540 aa	Known RBP	11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	PDP1	Q9P0J1	537 aa	Predicted RBP	11.29	□□□□□ -0.6
SREBF1-223	ENST00000584760	TVP23A	A6NH52	213 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	RIIAD1	A6NNX1	92 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	CLDN25	C9JDP6	229 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	GNGT2	O14610	69 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	TPD52L2	O43399	206 aa	Known RBP	11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	E2F6	O75461	281 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	IFNG	P01579	166 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	RAC2	P15153	192 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	ZNF823	P16415	610 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	ZNF3	P17036	446 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	HNF1A	P20823	631 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	GRK5	P34947	590 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	HLX	Q14774	488 aa	Predicted RBP	11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	PCK2	Q16822	640 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	SPRN	Q5BIV9	151 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	LINC01590	Q5TEZ4	76 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	OR2AJ1	Q8NGZ0	328 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	CMBL	Q96DG6	245 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	DIRC2	Q96SL1	478 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	CDADC1	Q9BWV3	514 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	HCAR1	Q9BXC0	346 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	C1QTNF5	Q9BXJ0	243 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	NARFL	Q9H6Q4	476 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	YY1AP1	Q9H869	796 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	WDR76	Q9H967	626 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	PTTG3P	Q9NZH4	202 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760	DNAJB9	Q9UBS3	223 aa		11.28	□□□□□ -0.6
SREBF1-223	ENST00000584760		F5H5K5	113 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760		H3BN98	237 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	TGFA	P01135	160 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	OTX1	P32242	354 aa	Predicted RBP	11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	ENTPD1	P49961	510 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	HFE	Q30201	348 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	AVPI1	Q5T686	147 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	SLC27A4	Q6P1M0	643 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	LINC01356	Q8N9X3	169 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	ZNF511	Q8NB15	262 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	OR5L1	Q8NGL2	311 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	OR6K6	Q8NGW6	343 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	PTP4A1	Q93096	173 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	EGLN1	Q9GZT9	426 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	NTN4	Q9HB63	628 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	WIPI2	Q9Y4P8	454 aa		11.27	□□□□□ -0.61
SREBF1-223	ENST00000584760	FAM183A	A6NL82	134 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	FAM157A	C9JC47	383 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760		M0R135	149 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	TIPRL	O75663	272 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	SPARC	P09486	303 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	OSM	P13725	252 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	ANOS1	P23352	680 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	FMO3	P31513	532 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	RASSF2	P50749	326 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	LMO4	P61968	165 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	TNFAIP6	P98066	277 aa	Predicted RBP	11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	HNRNPA0	Q13151	305 aa	Known RBP	11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	TEX30	Q5JUR7	227 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	ACSM5	Q6NUN0	579 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	SHQ1	Q6PI26	577 aa	Known RBP	11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	DCXR	Q7Z4W1	244 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	NAA40	Q86UY6	237 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	OR2Z1	Q8NG97	314 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	ST7L	Q8TDW4	575 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	CCL17	Q92583	94 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	UTP4	Q969X6	686 aa	Known RBP	11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	ZNF799	Q96GE5	643 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	MED20	Q9H944	212 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760	TREM2	Q9NZC2	230 aa		11.26	□□□□□ -0.61
SREBF1-223	ENST00000584760		A0A1B0GWJ7	208 aa		11.25	□□□□□ -0.61
SREBF1-223	ENST00000584760	IQCF6	A8MYZ5	107 aa		11.25	□□□□□ -0.61
SREBF1-223	ENST00000584760	SURF4	O15260	269 aa		11.25	□□□□□ -0.61
SREBF1-223	ENST00000584760	DEAF1	O75398	565 aa	Predicted RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms