RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 HAVCR1Q96D42 359 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 CMBLQ96DG6 245 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 SAMD8Q96LT4 415 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 JMJD8Q96S16 334 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 CDRT15Q96T59 188 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 COQ7Q99807 217 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 SLITRK2Q9H156 845 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 OR52D1Q9H346 318 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 IL1RAPQ9NPH3 570 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 G6PC2Q9NQR9 355 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 UBAP1Q9NZ09 502 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 CD300AQ9UGN4 299 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 IL19Q9UHD0 177 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 ARL2BPQ9Y2Y0 163 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 STARD10Q9Y365 291 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 NPTNQ9Y639 398 aa9.39□□□□□ -0.91
CCDC47-206ENST00000584112 IGLV1-36A0A0B4J1U3 117 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 IFNL4K9M1U5 179 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 RER1O15258 196 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 EPHA1P21709 976 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 RRM2P31350 389 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 MNAT1P51948 309 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 HIST1H3AP68431 136 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 FAM189A2Q15884 450 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 HIST2H3PS2Q5TEC6 136 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 SLC27A4Q6P1M0 643 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 LEG1Q6P5S2 330 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 FBXW12Q6X9E4 464 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 HIST2H3AQ71DI3 136 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 ZDHHC21Q8IVQ6 265 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 DEFB107AQ8IZN7 70 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 SPICQ8N5J4 248 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 SLC7A6Q92536 515 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 APOBEC3DQ96AK3 386 aaPredicted RBP9.38□□□□□ -0.91
CCDC47-206ENST00000584112 TSSK2Q96PF2 358 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 GPA33Q99795 319 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 IFT27Q9BW83 186 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 POFUT1Q9H488 388 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 FN3KRPQ9HA64 309 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 TMEM106BQ9NUM4 274 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 B9D1Q9UPM9 204 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 PPIAL4AQ9Y536 164 aa9.38□□□□□ -0.91
CCDC47-206ENST00000584112 STAB2Q8WWQ8 2551 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 PPIAL4EA0A075B759 164 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 PPIAL4CA0A0B4J2A2 164 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 PPIAL4DF5H284 164 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 DCTN6O00399 190 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 FOXH1O75593 365 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 KRT36O76013 467 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 PPIAL4FP0DN26 164 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 HIST1H1CP16403 213 aaKnown RBP9.37□□□□□ -0.91
CCDC47-206ENST00000584112 GSSP48637 474 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 LOXL3P58215 753 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 GNGT1P63211 74 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 COX10Q12887 443 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 TSPAN31Q12999 210 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 ECH1Q13011 328 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 MEP1BQ16820 701 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 TMEM155Q4W5P6 130 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 OTPQ5XKR4 325 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 RPL13AP3Q6NVV1 102 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 Q6ZR03 302 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 RHOUQ7L0Q8 258 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 C1QL2Q7Z5L3 287 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.37□□□□□ -0.91
CCDC47-206ENST00000584112 ZBTB46Q86UZ6 589 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 KLHL36Q8N4N3 616 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 LINC00471Q8N535 108 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 ZNF283Q8N7M2 679 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 SLC26A10Q8NG04 563 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 OR52L1Q8NGH7 329 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 OR2AJ1Q8NGZ0 328 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 OR4K13Q8NH42 304 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 NANPQ8TBE9 248 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 GNPDA2Q8TDQ7 276 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 UBE2FQ969M7 185 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 OR2V2Q96R30 315 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 NMNAT3Q96T66 252 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 SLC6A7Q99884 636 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 CDADC1Q9BWV3 514 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 TMPRSS13Q9BYE2 586 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 SRA1Q9HD15 236 aaKnown RBP9.37□□□□□ -0.91
CCDC47-206ENST00000584112 RPRD1BQ9NQG5 326 aaKnown RBP9.37□□□□□ -0.91
CCDC47-206ENST00000584112 ARL8BQ9NVJ2 186 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 KCNG2Q9UJ96 466 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 PPP1R3CQ9UQK1 317 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 LHFPL6Q9Y693 200 aa9.37□□□□□ -0.91
CCDC47-206ENST00000584112 CSMD3Q7Z407 3707 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 LOC105371242A0A075B767 164 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 POM121CA8CG34 1229 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 GPANK1O95872 356 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 IGHV2-70P01814 119 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 HLA-DQA2P01906 255 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 DBHP09172 617 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 SBK2P0C263 348 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 SELEP16581 610 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 MSX2P35548 267 aaPredicted RBP9.36□□□□□ -0.91
CCDC47-206ENST00000584112 BTG1P62324 171 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 SPRNQ5BIV9 151 aa9.36□□□□□ -0.91
CCDC47-206ENST00000584112 ZNF620Q6ZNG0 422 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms