RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SIRT7	Q9NRC8	400 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLC22A11	Q9NSA0	550 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PHF11	Q9UIL8	331 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TP53TG5	Q9Y2B4	290 aa		10.44	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR6C68	A6NDL8	312 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BCAT2	O15382	392 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ZNF25	P17030	456 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CXCL2	P19875	107 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MAP2K6	P52564	334 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PSG6	Q00889	435 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KLF9	Q13886	244 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CDK5R1	Q15078	307 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	HACD4	Q5VWC8	232 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CD276	Q5ZPR3	534 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	HDDC2	Q7Z4H3	204 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GKN2	Q86XP6	184 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BOD1L2	Q8IYS8	172 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GCNT2	Q8N0V5	402 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CAMKV	Q8NCB2	501 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR51A4	Q8NGJ6	313 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SYNPR	Q8TBG9	265 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ZNF524	Q96C55	264 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		Q96M85	177 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LINC00052	Q96N35	136 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SFXN2	Q96NB2	322 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR2M2	Q96R28	347 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TREM2	Q9NZC2	230 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LRIT1	Q9P2V4	623 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	UBQLN2	Q9UHD9	624 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CACNA1H	O95180	2353 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	EML5	Q05BV3	1969 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		A0A0J9YY10	115 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GPR75	O95800	540 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	IFNA4	P05014	189 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SULT1A3	P0DMM9	295 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SULT1A4	P0DMN0	295 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NME1	P15531	152 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	COMP	P49747	757 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LPAL2	Q16609	132 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KIRREL2	Q6UWL6	708 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ARRDC1	Q8N5I2	433 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BAHD1	Q8TBE0	780 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KCTD12	Q96CX2	325 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLC25A38	Q96DW6	304 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CHRD	Q9H2X0	955 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NOX3	Q9HBY0	568 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NTM	Q9P121	344 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KNTC1	P50748	2209 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PCDH15	Q96QU1	1955 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MEIKIN	A0A087WXM9	373 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TMEM72	A0PK05	275 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	C9orf170	A2RU37	121 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	HELT	A6NFD8	242 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GALR3	O60755	368 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ITGA10	O75578	1167 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SC5D	O75845	299 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	DBI	P07108	87 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MAOA	P21397	527 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RPS4Y1	P22090	263 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLC2A5	P22732	501 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ADH6	P28332	368 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PTGER4	P35408	488 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TSFM	P43897	325 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MMP15	P51511	669 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ABHD13	Q7L211	337 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GPALPP1	Q8IXQ4	340 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PPP1R14A	Q96A00	147 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ANKRD19P	Q9H560	264 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	COPZ2	Q9P299	210 aa		10.43	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FXYD6-FXYD2	A0A087WZ82	144 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		A0A1W2PR77	199 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CALCB	P10092	127 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LIPC	P11150	499 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CDK2	P24941	298 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR1D5	P58170	312 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PSMA6	P60900	246 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TNFRSF9	Q07011	255 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OPCML	Q14982	345 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	EIPR1	Q53HC9	387 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TMEM69	Q5SWH9	247 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PRAMEF17	Q5VTA0	474 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SMIM19	Q96E16	107 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NARS2	Q96I59	477 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FXYD6	Q9H0Q3	95 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ZNF768	Q9H5H4	540 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PGPEP1	Q9NXJ5	209 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KLHDC2	Q9Y2U9	406 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ACOT7	O00154	380 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	DCTN6	O00399	190 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ABCD4	O14678	606 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OIP5	O43482	229 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	WISP1	O95388	367 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PSMB1	P20618	241 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FOXL2	P58012	376 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	REC114	Q7Z4M0	266 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms