RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 PATL1Q86TB9 770 aaKnown RBP6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 FAM90A1Q86YD7 464 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 PARP8Q8N3A8 854 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 KLHL36Q8N4N3 616 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF283Q8N7M2 679 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC26A7Q8TE54 656 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 ITLN1Q8WWA0 313 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC25A28Q96A46 364 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 TLCD1Q96CP7 247 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 SGTBQ96EQ0 304 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 C4orf45Q96LM5 186 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 SIGLEC11Q96RL6 698 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 DIRC2Q96SL1 478 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 CGREF1Q99674 301 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 CCDC28BQ9BUN5 200 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 MS4A7Q9GZW8 240 aaPredicted RBP6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 PCDHAC1Q9H158 963 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 NANOGQ9H9S0 305 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 KLHL21Q9UJP4 597 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 RAB21Q9UL25 225 aa6.54□□□□□ -1.36
SMCHD1-210ENST00000583800 TRAV40A0A0B4J280 105 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 CEACAM18A8MTB9 384 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 H3BSA7 217 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 TGDSO95455 350 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 ABHD16AO95870 558 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 CST2P09228 141 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 TSPAN19P0C672 248 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 ERFP50548 548 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 ARHGDIAP52565 204 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 TAS2R41P59536 307 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 SRSF4Q08170 494 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 ENDOGQ14249 297 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 ESCO2Q56NI9 601 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 FAM27BQ5VT28 67 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 IGFN1Q86VF2 1251 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 OR2Z1Q8NG97 314 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 OR52E2Q8NGJ4 325 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 OR10A6Q8NH74 314 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 TMEM239Q8WW34 195 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 THOC1Q96FV9 657 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 SAMD8Q96LT4 415 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 TXNIPQ9H3M7 391 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 KAT8Q9H7Z6 458 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 ELOVL3Q9HB03 270 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 TMBIM4Q9HC24 238 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 STX18Q9P2W9 335 aaKnown RBP6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 OR5V1Q9UGF6 321 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 SH3GLB1Q9Y371 365 aa6.53□□□□□ -1.36
SMCHD1-210ENST00000583800 GMNCA6NCL1 334 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 NPIPB13A6NJU9 1138 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 NPIPB4C9JG80 1138 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 H7C1C5 153 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 CLDN34H7C241 214 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 ANGPT2O15123 496 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 DOK2O60496 412 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 OR5F1O95221 314 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 PLATP00750 562 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 VIMP08670 466 aaKnown RBP6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 NR2C1P13056 603 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 RPS2P15880 293 aaKnown RBP6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 GSTM3P21266 225 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 CD80P33681 288 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 MDH2P40926 338 aaKnown RBP6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 RBM34P42696 430 aaKnown RBP6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 GZMMP51124 257 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 LCN6P62502 163 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 PAX8Q06710 450 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 NFYCQ13952 458 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 VMACQ2NL98 169 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 ALG10Q5BKT4 473 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 FOXL2NBQ6ZUU3 175 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 C9orf139Q6ZV77 190 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 LRRC28Q86X40 367 aaPredicted RBP6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 SLC30A8Q8IWU4 369 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 C1orf174Q8IYL3 243 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 MICU2Q8IYU8 434 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 OR5AS1Q8N127 324 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 DPP10Q8N608 796 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 NPEPL1Q8NDH3 523 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 ZNF420Q8TAQ5 688 aaPredicted RBP6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 LRRC8CQ8TDW0 803 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 RASSF5Q8WWW0 418 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 LIPHQ8WWY8 451 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 TMIGD2Q96BF3 282 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 OR2V2Q96R30 315 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 ALG12Q9BV10 488 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 SLITRK2Q9H156 845 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 POLE4Q9NR33 117 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 RIMS3Q9UJD0 308 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 NDRG4Q9ULP0 352 aaKnown RBP6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 PPP1R3CQ9UQK1 317 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 NDUFAF1Q9Y375 327 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 MED31Q9Y3C7 131 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 TIMM10BQ9Y5J6 103 aa6.52□□□□□ -1.37
SMCHD1-210ENST00000583800 VWFP04275 2813 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 NOTCH1P46531 2555 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 TRAV27A0A087WT01 109 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 IGHV2-70DA0A0C4DH43 119 aa6.51□□□□□ -1.37
SMCHD1-210ENST00000583800 A0A0G2JK05 382 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms