RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 IQCMA0A1B0GVH7 501 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 E9PI62 339 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 INMTO95050 263 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 CLPTM1O96005 669 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 LALBAP00709 142 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 IGLV1-44P01699 117 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 CRYGSP22914 178 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 APEX1P27695 318 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 GRNP28799 593 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 OTX1P32242 354 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 HTR5AP47898 357 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 GBX2P52951 348 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ACSM1Q08AH1 577 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MRPL28Q13084 256 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MED22Q15528 200 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 NEDD8Q15843 81 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SSX8Q7RTT4 187 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ZNF367Q7RTV3 350 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 FAM220AQ7Z4H9 259 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 KLBQ86Z14 1044 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SLC7A6Q92536 515 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 FCGR1BQ92637 280 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 RORBQ92753 470 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 COG8Q96MW5 612 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 WFIKKN1Q96NZ8 548 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MOV10Q9HCE1 1003 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ISYNA1Q9NPH2 558 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ACOXLQ9NUZ1 547 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SCOCQ9UIL1 159 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 FBXL3Q9UKT7 428 aa14.2□□□□□ -0.14
CDK5RAP3-228ENST00000583363 LOC100509620A0A075B734 347 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 PRSS44E7EML9 344 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 F5H5K5 113 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SRSF10O75494 262 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 RPP14O95059 124 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 TFAP2AP05549 437 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 THBDP07204 575 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 CELA3BP08861 270 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 DBHP09172 617 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 STOMP27105 288 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 HSD11B1P28845 292 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 PSMB10P40306 273 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 PRKXP51817 358 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SORDQ00796 357 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 GALK2Q01415 458 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 C3orf36Q3SXR2 165 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SYT6Q5T7P8 510 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 FDX2Q6P4F2 183 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 HAVCR2Q8TDQ0 301 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SPTSSAQ969W0 71 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MS4A3Q96HJ5 214 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 POM121L2Q96KW2 1035 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MGLLQ99685 303 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 VCX3AQ9NNX9 186 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 R4GMQ9 66 aa14.19□□□□□ -0.14
CDK5RAP3-228ENST00000583363 TMEM269A0A1B0GVZ9 245 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 OGG1O15527 345 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 PNPP00491 289 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 APOC1P02654 83 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ACSM4P0C7M7 580 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 APLNRP35414 380 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 TGM4P49221 684 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 GDI2P50395 445 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MMP16P51512 607 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 IDH3GP51553 393 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 GTF2A1P52655 376 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 TPTEP56180 551 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 BDH1Q02338 343 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 CCDC58Q4VC31 144 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SEZ6L2Q6UXD5 910 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 NAA40Q86UY6 237 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ZNF283Q8N7M2 679 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MUL1Q969V5 352 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 DCLRE1CQ96SD1 692 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 TRIM36Q9NQ86 728 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 NPDC1Q9NQX5 325 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 NDRG3Q9UGV2 375 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 GRIP1Q9Y3R0 1128 aa14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SIRT4Q9Y6E7 314 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-228ENST00000583363 POLQO75417 2590 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 IGHV1-18A0A0C4DH31 117 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ACOD1A6NK06 481 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 M0R135 149 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 HSMCR30P0CW71 290 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 CCL2P13500 99 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ALDH3B2P48448 385 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 CX3CR1P49238 355 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 NR1H2P55055 460 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MLLT11Q13015 90 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 TPBGQ13641 420 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ALKBH1Q13686 389 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 TIGD6Q17RP2 521 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ZNF829Q3KNS6 432 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 ARMCX4Q5H9R4 360 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 RPL22L1Q6P5R6 122 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 DRAM2Q6UX65 266 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 PRSS45Q7RTY3 260 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 MYPOPQ86VE0 399 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 CATSPERDQ86XM0 798 aa14.17□□□□□ -0.14
CDK5RAP3-228ENST00000583363 SLC30A7Q8NEW0 376 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms