RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ST3GAL4Q11206 333 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 RSPO1Q2MKA7 263 aaPredicted RBP9□□□□□ -0.97
CCDC47-203ENST00000580986 KCTD21Q4G0X4 260 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 OTPQ5XKR4 325 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 SP5Q6BEB4 398 aaPredicted RBP9□□□□□ -0.97
CCDC47-203ENST00000580986 PRSS48Q7RTY5 328 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 KRT77Q7Z794 578 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 MYPOPQ86VE0 399 aaPredicted RBP9□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF786Q8N393 782 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 OR10H4Q8NGA5 316 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 OR52N1Q8NH53 320 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF799Q96GE5 643 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 PLPPR2Q96GM1 343 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 ZC3HAV1LQ96H79 300 aaKnown RBP9□□□□□ -0.97
CCDC47-203ENST00000580986 AMELYQ99218 206 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 DOK1Q99704 481 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 KCNS3Q9BQ31 491 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 C1QTNF5Q9BXJ0 243 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 BCL2L14Q9BZR8 327 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF442Q9H7R0 627 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 MOB1AQ9H8S9 216 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 PLEKHB1Q9UF11 243 aaPredicted RBP9□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF391Q9UJN7 358 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 MYRFQ9Y2G1 1151 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 RNF115Q9Y4L5 304 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 SPEF1Q9Y4P9 236 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 LRP12Q9Y561 859 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 PCDHGB5Q9Y5G0 923 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 LOC100996750A0A140TA64 210 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 A1L4Q6 167 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 C5orf49A4QMS7 147 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 METTL15A6NJ78 407 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 ABCD4O14678 606 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 APOL3O95236 402 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 TNFAIP8O95379 198 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 CD3EP07766 207 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 CELA3BP08861 270 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 RPSAP08865 295 aaKnown RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 ACSM4P0C7M7 580 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 LIMS3P0CW19 117 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 LIMS4P0CW20 117 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 HSD11B1P28845 292 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 RAD52P43351 418 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 RPS23P62266 143 aaKnown RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 NKX6-1P78426 367 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF829Q3KNS6 432 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 FDX2Q6P4F2 183 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 LRRN1Q6UXK5 716 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 AHSA2Q719I0 299 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 SSX6Q7RTT6 188 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 PRSS45Q7RTY3 260 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 FAM220AQ7Z4H9 259 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 STX19Q8N4C7 294 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 OR52H1Q8NGJ2 320 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 SNX33Q8WV41 574 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 APOBEC3DQ96AK3 386 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 C4orf45Q96LM5 186 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 NR1H4Q96RI1 486 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 ALG8Q9BVK2 526 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 KRTAP4-6Q9BYQ5 205 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 OPA3Q9H6K4 179 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 CDH20Q9HBT6 801 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 CENPMQ9NSP4 180 aa8.99□□□□□ -0.97
CCDC47-203ENST00000580986 PAK1IP1Q9NWT1 392 aaPredicted RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 CHCHD3Q9NX63 227 aaKnown RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 EIF3KQ9UBQ5 218 aaKnown RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 MRM2Q9UI43 246 aaKnown RBP8.99□□□□□ -0.97
CCDC47-203ENST00000580986 ICE1Q9Y2F5 2266 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 PRR14LQ5THK1 2151 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 PRR32B1ATL7 298 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 SHISA9B4DS77 424 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 RGS10O43665 173 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 SMPD2O60906 423 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 SRSF10O75494 262 aaKnown RBP8.98□□□□□ -0.97
CCDC47-203ENST00000580986 NR4A1P22736 598 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 CALCRP30988 508 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 GLRXP35754 106 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 TGM4P49221 684 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 CHN2P52757 468 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 HCCSP53701 268 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 UCP2P55851 309 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 GALK2Q01415 458 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 BDH1Q02338 343 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 ACSM1Q08AH1 577 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 SNTB1Q13884 538 aaKnown RBP8.98□□□□□ -0.97
CCDC47-203ENST00000580986 IRF3Q14653 427 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 TAF13Q15543 124 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 TBCEQ15813 527 aaPredicted RBP8.98□□□□□ -0.97
CCDC47-203ENST00000580986 CCDC58Q4VC31 144 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 LIPNQ5VXI9 398 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 TMEM154Q6P9G4 183 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 TMPRSS11AQ6ZMR5 421 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 KLHL36Q8N4N3 616 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 RFLNBQ8N5W9 214 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF485Q8NCK3 441 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 OR5L1Q8NGL2 311 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 RHNO1Q9BSD3 238 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 C1QTNF6Q9BXI9 259 aa8.98□□□□□ -0.97
CCDC47-203ENST00000580986 RGCCQ9H4X1 137 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms