RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 MZT2AQ6P582 158 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 C16orf87Q6PH81 154 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 STAC2Q6ZMT1 411 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 FAM57BQ71RH2 274 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 SLC16A14Q7RTX9 510 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 FGD2Q7Z6J4 655 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 LRRTM1Q86UE6 522 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 CROCCP3Q8IVE0 287 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 UBE2J2Q8N2K1 259 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 ZNF433Q8N7K0 673 aaPredicted RBP9.22□□□□□ -0.93
SS18-217ENST00000580958 OR8B12Q8NGG6 310 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 FGFBP3Q8TAT2 258 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 SLC7A6Q92536 515 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 THRSPQ92748 146 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 TMEM106AQ96A25 262 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 GMPPAQ96IJ6 420 aaPredicted RBP9.22□□□□□ -0.93
SS18-217ENST00000580958 WDFY2Q96P53 400 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 SLITRK2Q9H156 845 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 MOB1AQ9H8S9 216 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 GP6Q9HCN6 339 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 PLEK2Q9NYT0 353 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 NUFIP1Q9UHK0 495 aaKnown RBP9.22□□□□□ -0.93
SS18-217ENST00000580958 DAPK2Q9UIK4 370 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 HHLA2Q9UM44 414 aa9.22□□□□□ -0.93
SS18-217ENST00000580958 LAMA5O15230 3695 aa9.21□□□□□ -0.93
SS18-217ENST00000580958 MGAQ8IWI9 3026 aa9.21□□□□□ -0.93
SS18-217ENST00000580958 TRAV8-7A0A075B6U6 113 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 F5H5K5 113 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 SYNGR3O43761 229 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 FARS2O95363 451 aaKnown RBP9.21□□□□□ -0.94
SS18-217ENST00000580958 RAF1P04049 648 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ISG15P05161 165 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ADRB1P08588 477 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 DBHP09172 617 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 EPXP11678 715 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ADRA2CP18825 462 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ATF1P18846 271 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 CTSSP25774 331 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 APEX1P27695 318 aaKnown RBP9.21□□□□□ -0.94
SS18-217ENST00000580958 CD40LGP29965 261 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 OR3A2P47893 321 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ID4P47928 161 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 PPP5CP53041 499 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 UCNP55089 124 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 PPP3R1P63098 170 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 CXADRP78310 365 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ZNF45Q02386 682 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 FAPQ12884 760 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ACSF3Q4G176 576 aaPredicted RBP9.21□□□□□ -0.94
SS18-217ENST00000580958 SPANXN2Q5MJ10 180 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 HES5Q5TA89 166 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ZNF585AQ6P3V2 769 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 PARP16Q8N5Y8 322 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 C9orf106Q8NAJ2 232 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 OR13C3Q8NGS6 347 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 OR1F12Q8NHA8 337 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 AKR7LQ8NHP1 331 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ASB5Q8WWX0 329 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ACOT12Q8WYK0 555 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 PGAM5Q96HS1 289 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 GPR137Q96N19 417 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 SLC30A2Q9BRI3 323 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 OR2H1Q9GZK4 316 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 HDHD2Q9H0R4 259 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 WNT5BQ9H1J7 359 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ZCCHC4Q9H5U6 513 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 TCF7L1Q9HCS4 588 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 ZNF71Q9NQZ8 489 aaPredicted RBP9.21□□□□□ -0.94
SS18-217ENST00000580958 GLRX2Q9NS18 164 aa9.21□□□□□ -0.94
SS18-217ENST00000580958 A0A096LPE4 126 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 A0A0B4J203 849 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 A0A1B0GTI1 187 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 A0A1B0GVI7 797 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 A0A1W2PPZ6 126 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 C5orf63A6NC05 138 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 OR14I1A6ND48 311 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 OR6C6A6NF89 314 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 SYT7O43581 403 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 MAS1P04201 325 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 CD2P06729 351 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 MMP7P09237 267 aaPredicted RBP9.2□□□□□ -0.94
SS18-217ENST00000580958 HTR5AP47898 357 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 SLC6A9P48067 706 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 PCBD1P61457 104 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 PSG4Q00888 419 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 ECH1Q13011 328 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 MADCAM1Q13477 382 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 RSPO1Q2MKA7 263 aaPredicted RBP9.2□□□□□ -0.94
SS18-217ENST00000580958 NRN1LQ496H8 165 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 SFRP5Q5T4F7 317 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 ASPHD2Q6ICH7 369 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 CNIH2Q6PI25 160 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 FAM180AQ6UWF9 173 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 PRSS45Q7RTY3 260 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 LUZP2Q86TE4 346 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 NAA40Q86UY6 237 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 SNX29P2Q8IUI4 249 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 GCNT2Q8N0V5 402 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 DNAAF1Q8NEP3 725 aa9.2□□□□□ -0.94
SS18-217ENST00000580958 OR5H6Q8NGV6 325 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms