RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TAMM41Q96BW9 452 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 DMRTB1Q96MA1 342 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 NDEL1Q9GZM8 345 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 SLC22A4Q9H015 551 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 FN3KRPQ9HA64 309 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 EMC7Q9NPA0 242 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 NKIRAS1Q9NYS0 192 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 PTTG3PQ9NZH4 202 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 RNF7Q9UBF6 113 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 GRHPRQ9UBQ7 328 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 FBLN5Q9UBX5 448 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 VPREB3Q9UKI3 123 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 SH3GLB1Q9Y371 365 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 COL7A1Q02388 2944 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 TRAV38-1A0A0B4J264 116 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 TMEM120BA0PK00 339 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 ELOVL7A1L3X0 281 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 ANKRD61A6NGH8 418 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 RNASEK-C17orf49H0YIS7 233 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 H0YL77 283 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 LGALS8O00214 317 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 FBP2O00757 339 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 MLNRO43193 412 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 XPNPEP2O43895 674 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 GABRA5P31644 462 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 PMELP40967 661 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 CD200P41217 278 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 EGR3Q06889 387 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 MALLQ13021 153 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 PIN1Q13526 163 aaPredicted RBP7.44□□□□□ -1.22
SMG6-218ENST00000575454 CDONQ4KMG0 1287 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 AGKQ53H12 422 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 VAX1Q5SQQ9 334 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 FAM201AQ5SY85 155 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 CCDC80Q76M96 950 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 DHDDSQ86SQ9 333 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 DPP10Q8N608 796 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 BPIFA2Q96DR5 249 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 CGREF1Q99674 301 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 CCDC28BQ9BUN5 200 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 KAT8Q9H7Z6 458 aaKnown RBP7.44□□□□□ -1.22
SMG6-218ENST00000575454 CNTD2Q9H8S5 307 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 NECAP2Q9NVZ3 263 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 TMCC3Q9ULS5 477 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 NDUFAF1Q9Y375 327 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 KPTNQ9Y664 436 aa7.44□□□□□ -1.22
SMG6-218ENST00000575454 TEX13CA0A0J9YWL9 993 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 IGHV3-64DA0A0J9YX35 117 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 A0A1B0GVI7 797 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 ANGPT2O15123 496 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 ADAM20O43506 726 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 FAM20BO75063 409 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 SCG5P05408 212 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 IFI30P13284 250 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 EEF1B2P24534 225 aaKnown RBP7.43□□□□□ -1.22
SMG6-218ENST00000575454 SLC9A3P48764 834 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 RAD23AP54725 363 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 MTPNP58546 118 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 ARF6P62330 175 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 GUCA2AQ02747 115 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 ST3GAL3Q11203 375 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 COX10Q12887 443 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 VMACQ2NL98 169 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 CLEC12AQ5QGZ9 265 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 PGM2L1Q6PCE3 622 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 OAFQ86UD1 273 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 GLB1L2Q8IW92 636 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 CMTM4Q8IZR5 234 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 FAM156AQ8NDB6 213 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 BHLHE23Q8NDY6 225 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 GJC3Q8NFK1 279 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 OR4S1Q8NGB4 309 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 OR51A7Q8NH64 312 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 SLC7A6Q92536 515 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 COQ7Q99807 217 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 SH3GL1Q99961 368 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 ECSITQ9BQ95 431 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 HDHD2Q9H0R4 259 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 SIRPDQ9H106 197 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 AURKCQ9UQB9 309 aa7.43□□□□□ -1.22
SMG6-218ENST00000575454 PRSS37A4D1T9 235 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 OOEPA6NGQ2 149 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 EFCAB9A8MZ26 197 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 GMDSO60547 372 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 KHDRBS3O75525 346 aaKnown RBP7.42□□□□□ -1.22
SMG6-218ENST00000575454 PAHP00439 452 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 PRB2P02812 416 aaPredicted RBP7.42□□□□□ -1.22
SMG6-218ENST00000575454 HLA-DPB1P04440 258 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 RPL4P36578 427 aaKnown RBP7.42□□□□□ -1.22
SMG6-218ENST00000575454 IDH3AP50213 366 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 MZT1Q08AG7 82 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 ECH1Q13011 328 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 MAB21L1Q13394 359 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 OR8B8Q15620 311 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 BEND6Q5SZJ8 279 aaPredicted RBP7.42□□□□□ -1.22
SMG6-218ENST00000575454 SFRP4Q6FHJ7 346 aaPredicted RBP7.42□□□□□ -1.22
SMG6-218ENST00000575454 SLC35E4Q6ICL7 350 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 METAP1DQ6UB28 335 aaPredicted RBP7.42□□□□□ -1.22
SMG6-218ENST00000575454 BTN2A1Q7KYR7 527 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 RNF113BQ8IZP6 322 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms