RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 APOBEC3DQ96AK3 386 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 MRPL48Q96GC5 212 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 COG8Q96MW5 612 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 OR8B4Q96RC9 309 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 MYCBPQ99417 103 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 ANKRD60Q9BZ19 345 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF442Q9H7R0 627 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 NIPAL2Q9H841 368 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 PLEKHF2Q9H8W4 249 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 SP140LQ9H930 580 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 SLCO1C1Q9NYB5 712 aa12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 EXOGQ9Y2C4 368 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-218ENST00000574964 CENPEQ02224 2701 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 GPRIN2O60269 458 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF254O75437 659 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 NGFP01138 241 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 ANXA2P07355 339 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 GCH1P30793 250 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 TTKP33981 857 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 OPRL1P41146 370 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 CX3CR1P49238 355 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 SELENOVP59797 346 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 KRTAP10-9P60411 292 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 PPP1CBP62140 327 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 EGR3Q06889 387 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF718Q3SXZ3 478 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 AGAP6Q5VW22 663 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 RFPL4BQ6ZWI9 263 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF679Q8IYX0 411 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 MUC15Q8N387 334 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 YIPF7Q8N8F6 280 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 BRD7Q9NPI1 651 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 SCN3BQ9NY72 215 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 LRP12Q9Y561 859 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 ARID1AO14497 2285 aa12.51□□□□□ -0.41
NPLOC4-218ENST00000574964 A0A1W2PQL4 384 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 EFCAB10A6NFE3 127 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 TBX1O43435 398 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 OR4A8P0C604 315 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 SLC2A1P11166 492 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 SERPINF1P36955 418 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 ERVS71-1P61550 626 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 CSNK2BP67870 215 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 MALLQ13021 153 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 MED21Q13503 144 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 SPATA46Q5T0L3 261 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 PLEKHG7Q6ZR37 379 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 FAM220AQ7Z4H9 259 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 NAA40Q86UY6 237 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 RFLNBQ8N5W9 214 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 OR52I1Q8NGK6 324 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 SYNPRQ8TBG9 265 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 SLC25A40Q8TBP6 338 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 TMEM171Q8WVE6 324 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 PGAM5Q96HS1 289 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 DOK1Q99704 481 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 OR2J1Q9GZK6 312 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 PLK3Q9H4B4 646 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 MRPS18AQ9NVS2 196 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 PTTG3PQ9NZH4 202 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 DUSP13Q9UII6 198 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 FZR1Q9UM11 496 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 LAMP3Q9UQV4 416 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 MYRFQ9Y2G1 1151 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 STARD10Q9Y365 291 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 USF3Q68DE3 2245 aa12.5□□□□□ -0.41
NPLOC4-218ENST00000574964 J3QW42 95 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 MAGEB4O15481 346 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 XPNPEP2O43895 674 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ICMTO60725 284 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ATE1O95260 518 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 BMP4P12644 408 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 MYL12AP19105 171 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 TUBG1P23258 451 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 DCKP27707 260 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 OTX1P32242 354 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF121P58317 390 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ROM1Q03395 351 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF85Q03923 595 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ADIPOQQ15848 244 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF829Q3KNS6 432 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 KRTAP27-1Q3LI81 207 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 FAM57BQ71RH2 274 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 SSX6Q7RTT6 188 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 LHFPL3Q86UP9 236 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 STX19Q8N4C7 294 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 ZNF540Q8NDQ6 660 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 NRGNQ92686 78 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 GGHQ92820 318 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 MRPL24Q96A35 216 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 CCL19Q99731 98 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 C1QTNF5Q9BXJ0 243 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 FGF20Q9NP95 211 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 TUBG2Q9NRH3 451 aa12.49□□□□□ -0.41
NPLOC4-218ENST00000574964 INPP5EQ9NRR6 644 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms