RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	COMMD3-BMI1	R4GMX3	469 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	NAV3	Q8IVL0	2385 aa		12.43	□□□□□ -0.42
ABR-223	ENST00000573895	HIVEP2	P31629	2446 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	RTTN	Q86VV8	2226 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	IGHV2OR16-5	A0A0B4J2B6	119 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	TRIM64B	A6NI03	449 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	C12orf71	A8MTZ7	269 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	VSTM5	A8MXK1	200 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895		B9A039	149 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	SELENOF	O60613	162 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	SEC14L2	O76054	403 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	MPZL1	O95297	269 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	FARS2	O95363	451 aa	Known RBP	12.42	□□□□□ -0.42
ABR-223	ENST00000573895	HLA-H	P01893	362 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	CST2	P09228	141 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	B4GALT1	P15291	398 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF14	P17017	642 aa	Predicted RBP	12.42	□□□□□ -0.42
ABR-223	ENST00000573895	ALOX5AP	P20292	161 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	C21orf33	P30042	268 aa	Predicted RBP	12.42	□□□□□ -0.42
ABR-223	ENST00000573895	CALCR	P30988	508 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	CDA	P32320	146 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	IDH3G	P51553	393 aa	Predicted RBP	12.42	□□□□□ -0.42
ABR-223	ENST00000573895	CDH15	P55291	814 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	PCBD1	P61457	104 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	MVK	Q03426	396 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	GALE	Q14376	348 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	IRF3	Q14653	427 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	RAB35	Q15286	201 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	EFNB3	Q15768	340 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	SLC18B1	Q6NT16	456 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	TMPRSS11A	Q6ZMR5	421 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	RHOU	Q7L0Q8	258 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	KCTD20	Q7Z5Y7	419 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	SYT9	Q86SS6	491 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	SPART	Q8N0X7	666 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	CIART	Q8N365	385 aa	Predicted RBP	12.42	□□□□□ -0.42
ABR-223	ENST00000573895	SLC22A24	Q8N4F4	322 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	OR10H4	Q8NGA5	316 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	OR6N2	Q8NGY6	317 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	OR2AJ1	Q8NGZ0	328 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	OTOS	Q8NHW6	89 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	RHNO1	Q9BSD3	238 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	MRPS26	Q9BYN8	205 aa	Known RBP	12.42	□□□□□ -0.42
ABR-223	ENST00000573895	GSX1	Q9H4S2	264 aa	Predicted RBP	12.42	□□□□□ -0.42
ABR-223	ENST00000573895	VCX3A	Q9NNX9	186 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	CYB5R1	Q9UHQ9	305 aa		12.42	□□□□□ -0.42
ABR-223	ENST00000573895	CHD3	Q12873	2000 aa	Known RBP	12.42	□□□□□ -0.42
ABR-223	ENST00000573895	TMEM129	A0AVI4	362 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	HEXA	P06865	529 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	CELA3B	P08861	270 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	HTR1A	P08908	422 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	MRPL3	P09001	348 aa	Known RBP	12.41	□□□□□ -0.42
ABR-223	ENST00000573895	CD79A	P11912	226 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	CR1	P17927	2039 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	SERPINF1	P36955	418 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	NAA10	P41227	235 aa	Predicted RBP	12.41	□□□□□ -0.42
ABR-223	ENST00000573895	DSCR9	P59020	149 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	RAB1A	P62820	205 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	PIGF	Q07326	219 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	DBP	Q10586	325 aa	Predicted RBP	12.41	□□□□□ -0.42
ABR-223	ENST00000573895	TNK1	Q13470	666 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	MST1L	Q2TV78	715 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	KCTD18	Q6PI47	426 aa	Predicted RBP	12.41	□□□□□ -0.42
ABR-223	ENST00000573895	DPY19L4	Q7Z388	723 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	MYPOP	Q86VE0	399 aa	Predicted RBP	12.41	□□□□□ -0.42
ABR-223	ENST00000573895	NANOGP1	Q8N7R0	232 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	SGCD	Q92629	289 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	FCGR1B	Q92637	280 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	NABP1	Q96AH0	204 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	FOXN4	Q96NZ1	517 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	MND1	Q9BWT6	205 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	ERVK13-1	Q9NX77	482 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	LAMP5	Q9UJQ1	280 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895	GDF2	Q9UK05	429 aa	Predicted RBP	12.41	□□□□□ -0.42
ABR-223	ENST00000573895	CAB39	Q9Y376	341 aa	Predicted RBP	12.41	□□□□□ -0.42
ABR-223	ENST00000573895	ABCA1	O95477	2261 aa		12.41	□□□□□ -0.42
ABR-223	ENST00000573895		A0A1W2PQL4	384 aa	Predicted RBP	12.4	□□□□□ -0.42
ABR-223	ENST00000573895	NDUFS7	O75251	213 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	SULT1C4	O75897	302 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	APOL3	O95236	402 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	GPANK1	O95872	356 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	CLPTM1	O96005	669 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	MT-ND2	P03891	347 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	SCG5	P05408	212 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	SPARC	P09486	303 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	TACSTD2	P09758	323 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	LIMS3	P0CW19	117 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	LIMS4	P0CW20	117 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	ZNF35	P13682	527 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	ETV1	P50549	477 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	SNRPD2	P62316	118 aa	Known RBP	12.4	□□□□□ -0.42
ABR-223	ENST00000573895	ACTA2	P62736	377 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	ACTG2	P63267	376 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	EMX1	Q04741	257 aa	Predicted RBP	12.4	□□□□□ -0.42
ABR-223	ENST00000573895	HGFAC	Q04756	655 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	EGR3	Q06889	387 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	AQP6	Q13520	282 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	TBCE	Q15813	527 aa	Predicted RBP	12.4	□□□□□ -0.42
ABR-223	ENST00000573895	DEGS2	Q6QHC5	323 aa		12.4	□□□□□ -0.42
ABR-223	ENST00000573895	LYPD4	Q6UWN0	246 aa		12.4	□□□□□ -0.42

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