RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ZNF275Q9NSD4 429 aaPredicted RBP23.6■■□□□ 1.37
SCARF1-207ENST00000573867 DDX28Q9NUL7 540 aaKnown RBP23.6■■□□□ 1.37
SCARF1-207ENST00000573867 CACNG2Q9Y698 323 aa23.6■■□□□ 1.37
SCARF1-207ENST00000573867 J3QW42 95 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 ZNF593O00488 134 aaPredicted RBP23.59■■□□□ 1.37
SCARF1-207ENST00000573867 CDC14BO60729 498 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 MT-ND5P03915 603 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 TACSTD2P09758 323 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 ZNF23P17027 643 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 ACHEP22303 614 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 IL2RGP31785 369 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 CRISP1P54107 249 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 MRPS11P82912 194 aaKnown RBP23.59■■□□□ 1.37
SCARF1-207ENST00000573867 ECH1Q13011 328 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 HNRNPA0Q13151 305 aaKnown RBP23.59■■□□□ 1.37
SCARF1-207ENST00000573867 HIPK1Q86Z02 1210 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 PARP8Q8N3A8 854 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 ZNF540Q8NDQ6 660 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 BBS1Q8NFJ9 593 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 ST7LQ8TDW4 575 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 DNAJC9Q8WXX5 260 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 APOBEC3DQ96AK3 386 aaPredicted RBP23.59■■□□□ 1.37
SCARF1-207ENST00000573867 OR51V1Q9H2C8 321 aa23.59■■□□□ 1.37
SCARF1-207ENST00000573867 PLSCR5A0PG75 271 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 C5orf63A6NC05 138 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 G3V2T6 193 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 GLCEO94923 617 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 ADH4P08319 380 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 EPHA2P29317 976 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 KPNB1Q14974 876 aaKnown RBP23.58■■□□□ 1.37
SCARF1-207ENST00000573867 C6orf52Q5T4I8 152 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 FBXW12Q6X9E4 464 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 COG8Q96MW5 612 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 GABARAPL1Q9H0R8 117 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 MARCH7Q9H992 704 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 NAV3Q8IVL0 2385 aa23.58■■□□□ 1.37
SCARF1-207ENST00000573867 PRR23D1E9PI22 279 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-207ENST00000573867 WNT9BO14905 357 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 HMGN1P05114 100 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 PRR23D2P0DMB1 279 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-207ENST00000573867 RAC2P15153 192 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 ZNF16P17020 682 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-207ENST00000573867 OTX1P32242 354 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-207ENST00000573867 PRSS12P56730 875 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 FAM209AQ5JX71 171 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 USP51Q70EK9 711 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 CPOQ8IVL8 374 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 TIGD4Q8IY51 512 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 PYDC1Q8WXC3 89 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 SLAMF6Q96DU3 332 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 ZMYND19Q96E35 227 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-207ENST00000573867 SEMA6AQ9H2E6 1030 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 YAE1D1Q9NRH1 226 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 CYSLTR2Q9NS75 346 aa23.57■■□□□ 1.36
SCARF1-207ENST00000573867 CGGBP1Q9UFW8 167 aaPredicted RBP23.57■■□□□ 1.36
SCARF1-207ENST00000573867 M0R135 149 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 FCGR1AP12314 374 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 GSTT1P30711 240 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 RBMXP38159 391 aaKnown RBP23.56■■□□□ 1.36
SCARF1-207ENST00000573867 CRYBB2P43320 205 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 ACTR3P61158 418 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 CDK5R2Q13319 367 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 KDM4DQ6B0I6 523 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 OR2T2Q6IF00 324 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 ERI1Q8IV48 349 aaKnown RBP23.56■■□□□ 1.36
SCARF1-207ENST00000573867 OR5AS1Q8N127 324 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 ZNF799Q96GE5 643 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 INTS14Q96SY0 518 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 AMELYQ99218 206 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 SAP30LQ9HAJ7 183 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 DECR2Q9NUI1 292 aa23.56■■□□□ 1.36
SCARF1-207ENST00000573867 TMEFF2Q9UIK5 374 aaPredicted RBP23.56■■□□□ 1.36
SCARF1-207ENST00000573867 IGHV1-69-2A0A0G2JMI3 117 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 H3BNX3 289 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 TLX2O43763 284 aaPredicted RBP23.55■■□□□ 1.36
SCARF1-207ENST00000573867 PAICSP22234 425 aaKnown RBP23.55■■□□□ 1.36
SCARF1-207ENST00000573867 SLC2A5P22732 501 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 LIPAP38571 399 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 GPR6P46095 362 aaPredicted RBP23.55■■□□□ 1.36
SCARF1-207ENST00000573867 BLVRAP53004 296 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 PTGES3Q15185 160 aaKnown RBP23.55■■□□□ 1.36
SCARF1-207ENST00000573867 SPATC1Q76KD6 591 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 DPY19L4Q7Z388 723 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 ZDHHC13Q8IUH4 622 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 OR5L1Q8NGL2 311 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 OR6N2Q8NGY6 317 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 MSI2Q96DH6 328 aaKnown RBP23.55■■□□□ 1.36
SCARF1-207ENST00000573867 KRT84Q9NSB2 600 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 TVP23BQ9NYZ1 205 aa23.55■■□□□ 1.36
SCARF1-207ENST00000573867 SONP18583 2426 aaKnown RBP23.55■■□□□ 1.36
SCARF1-207ENST00000573867 ABCA2Q9BZC7 2435 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 EBAG9O00559 213 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 TPD52L2O43399 206 aaKnown RBP23.54■■□□□ 1.36
SCARF1-207ENST00000573867 SELENOFO60613 162 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 LCATP04180 440 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 CD55P08174 381 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 TPTEP56180 551 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 SNAI3Q3KNW1 292 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 CYB5R2Q6BCY4 276 aa23.54■■□□□ 1.36
SCARF1-207ENST00000573867 CENPMQ9NSP4 180 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms