RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SLC6A6P31641 620 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 IL2RGP31785 369 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 LIPAP38571 399 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 MPV17P39210 176 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 CRYBB2P43320 205 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 GSSP48637 474 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 CENPAP49450 140 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 ZNF81P51508 661 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 SCAND1P57086 179 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 PPP1CBP62140 327 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 CCL8P80075 99 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 TSPAN31Q12999 210 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 AQP6Q13520 282 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 TRIM25Q14258 630 aaKnown RBP6.33□□□□□ -1.4
NUP88-205ENST00000572809 KCNMB1Q16558 191 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 TSTQ16762 297 aaKnown RBP6.33□□□□□ -1.4
NUP88-205ENST00000572809 SPATA46Q5T0L3 261 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 MBNL2Q5VZF2 373 aaKnown RBP6.33□□□□□ -1.4
NUP88-205ENST00000572809 OTPQ5XKR4 325 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 DNM1P34Q6PK57 102 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 RINLQ6ZS11 566 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 PTCHD4Q6ZW05 846 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 ADCK1Q86TW2 530 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 LINC00471Q8N535 108 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 LINC01356Q8N9X3 169 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 SAMD8Q96LT4 415 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 TSSK2Q96PF2 358 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 SOX7Q9BT81 388 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 IFT27Q9BW83 186 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 OR52D1Q9H346 318 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 TUBG2Q9NRH3 451 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 ZNF275Q9NSD4 429 aaPredicted RBP6.33□□□□□ -1.4
NUP88-205ENST00000572809 TBCCD1Q9NVR7 557 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 PLEK2Q9NYT0 353 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 FBLN5Q9UBX5 448 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 KLHL21Q9UJP4 597 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 B9D1Q9UPM9 204 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 GRIP1Q9Y3R0 1128 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 ABCA2Q9BZC7 2435 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 IGHV1-69-2A0A0G2JMI3 117 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 TCRBV5S2A0A599 114 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 H3BSA7 217 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 TNFRSF11BO00300 401 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 DCTN6O00399 190 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 SPRY3O43610 288 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 IDH3BO43837 385 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 DOK2O60496 412 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 RP2O75695 350 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 NCR1O76036 304 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 ABHD16AO95870 558 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 GPANK1O95872 356 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 RENP00797 406 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 GASTP01350 101 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 DBHP09172 617 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 T-ENOLP0DO92 83 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 HIST1H1CP16403 213 aaKnown RBP6.32□□□□□ -1.4
NUP88-205ENST00000572809 IGFBP5P24593 272 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 HTR5AP47898 357 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 MMP15P51511 669 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 MS4A2Q01362 244 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 GLO1Q04760 184 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 CCNIQ14094 377 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 HFEQ30201 348 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 CCDC92Q53HC0 331 aaPredicted RBP6.32□□□□□ -1.4
NUP88-205ENST00000572809 MTX3Q5HYI7 312 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 FAM120AOSQ5T036 256 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 PGBD2Q6P3X8 592 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 LEG1Q6P5S2 330 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 USP51Q70EK9 711 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 DHFR2Q86XF0 187 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 OR6V1Q8N148 313 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 GJC3Q8NFK1 279 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 OR4K13Q8NH42 304 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 OR1F12Q8NHA8 337 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 FANK1Q8TC84 345 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 IPCEF1Q8WWN9 437 aaPredicted RBP6.32□□□□□ -1.4
NUP88-205ENST00000572809 GTF3AQ92664 365 aaKnown RBP6.32□□□□□ -1.4
NUP88-205ENST00000572809 PTP4A1Q93096 173 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 CMBLQ96DG6 245 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 COG8Q96MW5 612 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 NMNAT3Q96T66 252 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 TRIM15Q9C019 465 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 RACGAP1Q9H0H5 632 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 C1orf21Q9H246 121 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 MUC13Q9H3R2 512 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 NARFLQ9H6Q4 476 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 CYSLTR2Q9NS75 346 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 C19orf73Q9NVV2 129 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 ZDHHC8Q9ULC8 765 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 STARD10Q9Y365 291 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 LYVE1Q9Y5Y7 322 aa6.32□□□□□ -1.4
NUP88-205ENST00000572809 SONP18583 2426 aaKnown RBP6.32□□□□□ -1.4
NUP88-205ENST00000572809 IGLV1-36A0A0B4J1U3 117 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 B4DSR2 109 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 WNT9BO14905 357 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 RER1O15258 196 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 TIMM8AO60220 97 aaPredicted RBP6.31□□□□□ -1.4
NUP88-205ENST00000572809 CCNB2O95067 398 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 IGHV1-46P01743 117 aa6.31□□□□□ -1.4
NUP88-205ENST00000572809 ADH4P08319 380 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms