RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 FOXH1O75593 365 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 HLA-DPB1P04440 258 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 WNT2P09544 360 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 ACSM4P0C7M7 580 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 ZNF12P17014 697 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 TNFRSF1AP19438 455 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 TNFSF4P23510 183 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 CRABP1P29762 137 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 RRM2P31350 389 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 KRT72Q14CN4 511 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 FAM201AQ5SY85 155 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 SLC35F1Q5T1Q4 408 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 C12orf54Q6X4T0 127 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 PGAM4Q8N0Y7 254 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 APOBEC3DQ96AK3 386 aaPredicted RBP15.19■□□□□ 0.02
CHD3-214ENST00000572579 MAP6Q96JE9 813 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 IFT27Q9BW83 186 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 EGLN3Q9H6Z9 239 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 IL1RAPQ9NPH3 570 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 CYB5R1Q9UHQ9 305 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 INSIG2Q9Y5U4 225 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 DYSFO75923 2080 aa15.19■□□□□ 0.02
CHD3-214ENST00000572579 TANC2Q9HCD6 1990 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 CEACAM18A8MTB9 384 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 F5H5P2 479 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 J3QW42 95 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 OR10H3O60404 316 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 CYB5R3P00387 301 aaPredicted RBP15.18■□□□□ 0.02
CHD3-214ENST00000572579 SLC6A6P31641 620 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 CD80P33681 288 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 RPS27P42677 84 aaKnown RBP15.18■□□□□ 0.02
CHD3-214ENST00000572579 RGS6P49758 472 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 HMGA2P52926 109 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 MAB21L1Q13394 359 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 ZNF770Q6IQ21 691 aaPredicted RBP15.18■□□□□ 0.02
CHD3-214ENST00000572579 LYPD4Q6UWN0 246 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 ZNF620Q6ZNG0 422 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 PIGWQ7Z7B1 504 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 SDR9C7Q8NEX9 313 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 OR52E2Q8NGJ4 325 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 ST7LQ8TDW4 575 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 DACT3Q96B18 629 aaPredicted RBP15.18■□□□□ 0.02
CHD3-214ENST00000572579 C1orf147Q96MC9 270 aaPredicted RBP15.18■□□□□ 0.02
CHD3-214ENST00000572579 COG8Q96MW5 612 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 PLA2G12AQ9BZM1 189 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 HDHD2Q9H0R4 259 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 ZNF69Q9UC07 566 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 MAGEL2Q9UJ55 1249 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 POLR1DQ9Y2S0 133 aa15.18■□□□□ 0.02
CHD3-214ENST00000572579 A8MXK9 166 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 IQCF6A8MYZ5 107 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 F5H5K5 113 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 SMIM11AP58511 58 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 PAX8Q06710 450 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 TSPAN31Q12999 210 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 GK2Q14410 553 aaPredicted RBP15.17■□□□□ 0.02
CHD3-214ENST00000572579 SAMD4BQ5PRF9 694 aaKnown RBP15.17■□□□□ 0.02
CHD3-214ENST00000572579 CLEC12AQ5QGZ9 265 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 MOGAT3Q86VF5 341 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 JAZF1Q86VZ6 243 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 KLHL36Q8N4N3 616 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 SPICQ8N5J4 248 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 BHLHE23Q8NDY6 225 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 OR4C15Q8NGM1 316 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 OR8D4Q8NGM9 314 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 OR13G1Q8NGZ3 307 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 NSMCE2Q96MF7 247 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 ZNF48Q96MX3 618 aaPredicted RBP15.17■□□□□ 0.02
CHD3-214ENST00000572579 ZNF582Q96NG8 517 aaPredicted RBP15.17■□□□□ 0.02
CHD3-214ENST00000572579 BTBD10Q9BSF8 475 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 TAGLN3Q9UI15 199 aa15.17■□□□□ 0.02
CHD3-214ENST00000572579 BHLHE40O14503 412 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 ATP8B1O43520 1251 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 FABP3P05413 133 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 PYCR1P32322 319 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 MDH2P40926 338 aaKnown RBP15.16■□□□□ 0.02
CHD3-214ENST00000572579 DNM1P34Q6PK57 102 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 ZDHHC21Q8IVQ6 265 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 TEX29Q8N6K0 151 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 SIGLECL1Q8N7X8 197 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 CYB561A3Q8NBI2 242 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 OR9Q2Q8NGE9 314 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 OR5L1Q8NGL2 311 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 GNPDA2Q8TDQ7 276 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 PITX2Q99697 317 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 SUCNR1Q9BXA5 334 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 KRCC1Q9NPI7 259 aaPredicted RBP15.16■□□□□ 0.02
CHD3-214ENST00000572579 LYVE1Q9Y5Y7 322 aa15.16■□□□□ 0.02
CHD3-214ENST00000572579 TRIM77I1YAP6 450 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 SURF4O15260 269 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 IDH3BO43837 385 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 GMNNO75496 209 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 RENP00797 406 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 GASTP01350 101 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 EGR1P18146 543 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 ATP6V1B2P21281 511 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 UBA52P62987 128 aaKnown RBP15.15■□□□□ 0.02
CHD3-214ENST00000572579 ACTG1P63261 375 aa15.15■□□□□ 0.02
CHD3-214ENST00000572579 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.15■□□□□ 0.02
CHD3-214ENST00000572579 TRAP1Q12931 704 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms