RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MESTQ5EB52 335 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 METTL11BQ5VVY1 283 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 PRAMEF6Q5VXH4 476 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 Q6ZPA2 131 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 LDLRAD3Q86YD5 345 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 ZSCAN4Q8NAM6 433 aaPredicted RBP16.43■□□□□ 0.22
CCDC40-206ENST00000572083 OR5L1Q8NGL2 311 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 RERGLQ9H628 205 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 SMURF1Q9HCE7 757 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 DNAH3Q8TD57 4116 aa16.43■□□□□ 0.22
CCDC40-206ENST00000572083 TEX13CA0A0J9YWL9 993 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 PIN1P1O15428 100 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 GATA4P43694 442 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 NPY4RP50391 375 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 CLEC12AQ5QGZ9 265 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 CD276Q5ZPR3 534 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 SFRP4Q6FHJ7 346 aaPredicted RBP16.42■□□□□ 0.22
CCDC40-206ENST00000572083 GDPGP1Q6ZNW5 385 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 OAFQ86UD1 273 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 NRMQ8IXM6 262 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 OR11L1Q8NGX0 322 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 Q8TCH9 128 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 APOBEC3DQ96AK3 386 aaPredicted RBP16.42■□□□□ 0.22
CCDC40-206ENST00000572083 Q96M85 177 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 SIRPDQ9H106 197 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 RABEP2Q9H5N1 569 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 TMEM100Q9NV29 134 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 ERVK-18Q9QC07 812 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 GRHPRQ9UBQ7 328 aa16.42■□□□□ 0.22
CCDC40-206ENST00000572083 TET2Q6N021 2002 aaPredicted RBP16.41■□□□□ 0.22
CCDC40-206ENST00000572083 ELOVL7A1L3X0 281 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 XKRYO14609 159 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 LIPFP07098 398 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 RPL4P36578 427 aaKnown RBP16.41■□□□□ 0.22
CCDC40-206ENST00000572083 SLC9A3P48764 834 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 ST3GAL3Q11203 375 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 MPPED2Q15777 294 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 DHRS7BQ6IAN0 325 aaPredicted RBP16.41■□□□□ 0.22
CCDC40-206ENST00000572083 BOLLQ8N9W6 283 aaKnown RBP16.41■□□□□ 0.22
CCDC40-206ENST00000572083 TLCD1Q96CP7 247 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 PRRC1Q96M27 445 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 ZNF570Q96NI8 536 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 C16orf95Q9H693 158 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 A4GNTQ9UNA3 340 aa16.41■□□□□ 0.22
CCDC40-206ENST00000572083 A0A1B0GWJ7 208 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 PRSS37A4D1T9 235 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 C5orf63A6NC05 138 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 EFCAB9A8MZ26 197 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 IMPA2O14732 288 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 ADAM20O43506 726 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 ARF6P62330 175 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 EGR3Q06889 387 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 RABL3Q5HYI8 236 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.4■□□□□ 0.22
CCDC40-206ENST00000572083 PNLDC1Q8NA58 520 aaKnown RBP16.4■□□□□ 0.22
CCDC40-206ENST00000572083 ECSITQ9BQ95 431 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 SYT4Q9H2B2 425 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 SEMA6AQ9H2E6 1030 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 RASSF4Q9H2L5 321 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 RHCGQ9UBD6 479 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 ATPIF1Q9UII2 106 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 COA3Q9Y2R0 106 aaPredicted RBP16.4■□□□□ 0.22
CCDC40-206ENST00000572083 POLR1DQ9Y2S0 133 aa16.4■□□□□ 0.22
CCDC40-206ENST00000572083 SLC16A7O60669 478 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 CD200P41217 278 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 YAP1P46937 504 aaKnown RBP16.39■□□□□ 0.21
CCDC40-206ENST00000572083 RAD23AP54725 363 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 LSM6P62312 80 aaKnown RBP16.39■□□□□ 0.21
CCDC40-206ENST00000572083 FAM189A2Q15884 450 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 LRRC23Q53EV4 343 aaPredicted RBP16.39■□□□□ 0.21
CCDC40-206ENST00000572083 GLB1L2Q8IW92 636 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 LRTOMTQ8WZ04 291 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 TPD52L3Q96J77 140 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 HCAR1Q9BXC0 346 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 DPAGT1Q9H3H5 408 aa16.39■□□□□ 0.21
CCDC40-206ENST00000572083 ZNF816-ZNF321PA0A0X1KG74 233 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 HTR3EA5X5Y0 456 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 CDC42EP2O14613 210 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 CD14P08571 375 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 ZNF26P17031 533 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-206ENST00000572083 GPR4P46093 362 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 PRKCDQ05655 676 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 OR8B8Q15620 311 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 ANKDD1AQ495B1 522 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 BEND6Q5SZJ8 279 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-206ENST00000572083 KPRPQ5T749 579 aaPredicted RBP16.38■□□□□ 0.21
CCDC40-206ENST00000572083 SAMD5Q5TGI4 173 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 NANOGP8Q6NSW7 305 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 FAM122BQ7Z309 247 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 CALHM3Q86XJ0 350 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 CELF2-AS1Q8N7Q2 184 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 ERGIC1Q969X5 290 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 RNF7Q9UBF6 113 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 RAB21Q9UL25 225 aa16.38■□□□□ 0.21
CCDC40-206ENST00000572083 J3KTA2 159 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 LGALS8O00214 317 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 KHDRBS3O75525 346 aaKnown RBP16.37■□□□□ 0.21
CCDC40-206ENST00000572083 FCN3O75636 299 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 COX10Q12887 443 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms