RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TMEM160Q9NX00 188 aa11.92□□□□□ -0.5
RPAIN-209ENST00000571558 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
RPAIN-209ENST00000571558 LAMP5Q9UJQ1 280 aa11.92□□□□□ -0.5
RPAIN-209ENST00000571558 GDF2Q9UK05 429 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-209ENST00000571558 LAMP3Q9UQV4 416 aa11.92□□□□□ -0.5
RPAIN-209ENST00000571558 LSM2Q9Y333 95 aaKnown RBP11.92□□□□□ -0.5
RPAIN-209ENST00000571558 TMEM14AQ9Y6G1 99 aa11.92□□□□□ -0.5
RPAIN-209ENST00000571558 ANK2Q01484 3957 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 A0A087WXM4 84 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 A0A096LPE4 126 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 A0A1W2PPZ6 126 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 TMEM129A0AVI4 362 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 DAPL1A0PJW8 107 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 ZNF670-ZNF695F2Z2N8 137 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 FARS2O95363 451 aaKnown RBP11.91□□□□□ -0.5
RPAIN-209ENST00000571558 THBDP07204 575 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 MYL12AP19105 171 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 MAP2K4P45985 399 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 ROM1Q03395 351 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 EIF2B1Q14232 305 aaKnown RBP11.91□□□□□ -0.5
RPAIN-209ENST00000571558 TSC22D1Q15714 1073 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 TBCEQ15813 527 aaPredicted RBP11.91□□□□□ -0.5
RPAIN-209ENST00000571558 TBRG1Q3YBR2 411 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 CDONQ4KMG0 1287 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 XAF1Q6GPH4 301 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 DNM1P46Q6ZS02 220 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 SLC16A14Q7RTX9 510 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 NANOGP1Q8N7R0 232 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 RNF133Q8WVZ7 376 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 ASB17Q8WXJ9 295 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 WACQ9BTA9 647 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 CDADC1Q9BWV3 514 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 CCDC90BQ9GZT6 254 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 ACOT13Q9NPJ3 140 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 PNRC2Q9NPJ4 139 aaKnown RBP11.91□□□□□ -0.5
RPAIN-209ENST00000571558 B3GNT2Q9NY97 397 aa11.91□□□□□ -0.5
RPAIN-209ENST00000571558 PHYHO14832 338 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 RER1O15258 196 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 RAD51DO75771 328 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 ABHD16AO95870 558 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 PTHP01270 115 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 HLA-HP01893 362 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 PATE4P0C8F1 98 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-209ENST00000571558 ZNF32P17041 273 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 TUBA4AP68366 448 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 EGR3Q06889 387 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 CCDC92Q53HC0 331 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-209ENST00000571558 OR7E24Q6IFN5 339 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 ZNF322Q6U7Q0 402 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-209ENST00000571558 RHOUQ7L0Q8 258 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 C17orf78Q8N4C9 275 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 GJC3Q8NFK1 279 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 OR52N1Q8NH53 320 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 OR52N5Q8NH56 324 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 RNF166Q96A37 237 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-209ENST00000571558 PLPPR2Q96GM1 343 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 ALG8Q9BVK2 526 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 C1orf198Q9H425 327 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 ISG20L2Q9H9L3 353 aaKnown RBP11.9□□□□□ -0.5
RPAIN-209ENST00000571558 BARX1Q9HBU1 254 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-209ENST00000571558 NOX3Q9HBY0 568 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 LPAR3Q9UBY5 353 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 POLR1DQ9Y2S0 133 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 SNX5Q9Y5X3 404 aa11.9□□□□□ -0.5
RPAIN-209ENST00000571558 ARPC4-TTLL3A0A0A6YYG9 625 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 CIB4A0PJX0 185 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 MAGEB4O15481 346 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-209ENST00000571558 OPRL1P41146 370 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 PCBD1P61457 104 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 PSG4Q00888 419 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 OR2G6Q5TZ20 316 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 BHLHA15Q7RTS1 189 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-209ENST00000571558 EGFL6Q8IUX8 553 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 SYS1Q8N2H4 156 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 WDR31Q8NA23 367 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 OR2AJ1Q8NGZ0 328 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 THEM6Q8WUY1 208 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 AKAP1Q92667 903 aaKnown RBP eCLIP11.89□□□□□ -0.51
RPAIN-209ENST00000571558 SLAMF6Q96DU3 332 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF75AQ96N20 296 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 OR8B4Q96RC9 309 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 HDHD5Q9BXW7 423 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 MRPS26Q9BYN8 205 aaKnown RBP11.89□□□□□ -0.51
RPAIN-209ENST00000571558 TTTY10Q9BZA0 68 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 OR2H1Q9GZK4 316 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 WNT5BQ9H1J7 359 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 SLC17A5Q9NRA2 495 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 DDX28Q9NUL7 540 aaKnown RBP11.89□□□□□ -0.51
RPAIN-209ENST00000571558 SLCO1C1Q9NYB5 712 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 MRM2Q9UI43 246 aaKnown RBP11.89□□□□□ -0.51
RPAIN-209ENST00000571558 ERGIC3Q9Y282 383 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 CAB39Q9Y376 341 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-209ENST00000571558 TIMM10BQ9Y5J6 103 aa11.89□□□□□ -0.51
RPAIN-209ENST00000571558 OR6C6A6NF89 314 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 OR5H1A6NKK0 313 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 PLAUP00749 431 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 TFAP2AP05549 437 aa11.88□□□□□ -0.51
RPAIN-209ENST00000571558 DANCRP0C864 163 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms