RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PRAMEF7Q5VXH5 474 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 RGS7BPQ6MZT1 257 aaPredicted RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 ANKRD26P1Q6NSI1 321 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 NDUFA11Q86Y39 141 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 KRT73Q86Y46 540 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 LDLRAD3Q86YD5 345 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 FAM90A1Q86YD7 464 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 SBSPONQ8IVN8 264 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 ZNF614Q8N883 585 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 CDRT4Q8N9R6 151 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 C11orf65Q8NCR3 313 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 OR4A15Q8NGL6 344 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 OR5K1Q8NHB7 308 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 SYNPRQ8TBG9 265 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 ST8SIA1Q92185 356 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 HOXB13Q92826 284 aaPredicted RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 FAM162AQ96A26 154 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 OTUB1Q96FW1 271 aaPredicted RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 SEPHS2Q99611 448 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 CITED2Q99967 270 aaPredicted RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 PCGF1Q9BSM1 259 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 YTHDF1Q9BYJ9 559 aaKnown RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 GABARAPL1Q9H0R8 117 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 PPA2Q9H2U2 334 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 IL1RAPQ9NPH3 570 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 CTPS2Q9NRF8 586 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 ACER3Q9NUN7 267 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 ACOXLQ9NUZ1 547 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 SMPD3Q9NY59 655 aaPredicted RBP5.7□□□□□ -1.5
CHD3-213ENST00000571249 SLCO1C1Q9NYB5 712 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 CHRNA9Q9UGM1 479 aa5.7□□□□□ -1.5
CHD3-213ENST00000571249 DNAH2Q9P225 4427 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 IGLV3-9A0A075B6K5 115 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CENPVL1A0A0U1RR11 272 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CENPVL3A0A0U1RRI6 287 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 RNF103-CHMP3A0A140T963 221 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SLC22A23A1A5C7 686 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SAC3D1A6NKF1 404 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 RNASEK-C17orf49H0YIS7 233 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 FAM229AH3BQW9 127 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 F2RL2O00254 374 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 EI24O14681 340 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 ZNF264O43296 627 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 TPST1O60507 370 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 EIF4E2O60573 245 aaKnown RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 EIF1BO60739 113 aaKnown RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 SCGB1D1O95968 90 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CST1P01037 141 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 IGHV1-46P01743 117 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 C1QCP02747 245 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 ALPLP05186 524 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 WNT2P09544 360 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 IFI6P09912 130 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 UBTFL6P0CB48 400 aaPredicted RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 SMIM18P0DKX4 95 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 OR8G3PP0DMU2 310 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 OR12D1P0DN82 309 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CD79AP11912 226 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CAPGP40121 348 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CLK1P49759 484 aaKnown RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 ZNF81P51508 661 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CCR9P51686 369 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 RPS6KA3P51812 740 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SELENOWP63302 87 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SLC35A2P78381 396 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 PIGFQ07326 219 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHD3-213ENST00000571249 APOFQ13790 326 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 GK3PQ14409 553 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 GSG1Q2KHT4 349 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 RFX4Q33E94 735 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 KCTD21Q4G0X4 260 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SPRNQ5BIV9 151 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 GCNT6Q5T4J0 391 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 NIPAL3Q6P499 406 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 C11orf88Q6PI97 169 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 PATL1Q86TB9 770 aaKnown RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 GPAT4Q86UL3 456 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 LRRC28Q86X40 367 aaPredicted RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 ARMC8Q8IUR7 673 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 DHRSXQ8N5I4 330 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 COX18Q8N8Q8 333 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CDC26Q8NHZ8 85 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 MIPOL1Q8TD10 442 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SFXN5Q8TD22 340 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 TMEM234Q8WY98 164 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 CIDECQ96AQ7 238 aaPredicted RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 NEIL1Q96FI4 390 aaPredicted RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 C7orf34Q96L11 122 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 AMDHD1Q96NU7 426 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SLC35A5Q9BS91 424 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SSBP3Q9BWW4 388 aaPredicted RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 FAM192AQ9GZU8 254 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 HOXD1Q9GZZ0 328 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 SERHL2Q9H4I8 314 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 A4GALTQ9NPC4 353 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 HEYLQ9NQ87 328 aaPredicted RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 MIEF1Q9NQG6 463 aa5.69□□□□□ -1.5
CHD3-213ENST00000571249 THUMPD1Q9NXG2 353 aaKnown RBP5.69□□□□□ -1.5
CHD3-213ENST00000571249 B3GNT2Q9NY97 397 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms