RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 DHRSXQ8N5I4 330 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 GJC3Q8NFK1 279 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 OR8J1Q8NGP2 316 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 OR1F12Q8NHA8 337 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 C10orf105Q8TEF2 133 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 ZNF582Q96NG8 517 aaPredicted RBP11.45□□□□□ -0.58
CCDC40-205ENST00000571028 TEAD3Q99594 435 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 C8orf4Q9NR00 106 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 EIF3KQ9UBQ5 218 aaKnown RBP11.45□□□□□ -0.58
CCDC40-205ENST00000571028 NDRG4Q9ULP0 352 aaKnown RBP11.45□□□□□ -0.58
CCDC40-205ENST00000571028 GRIP1Q9Y3R0 1128 aa11.45□□□□□ -0.58
CCDC40-205ENST00000571028 APOL3O95236 402 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 LCKP06239 509 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 DBHP09172 617 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 SLC2A5P22732 501 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 TTKP33981 857 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 SRP14P37108 136 aaKnown RBP11.44□□□□□ -0.58
CCDC40-205ENST00000571028 EFNB1P98172 346 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 IL5RAQ01344 420 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 SNTB2Q13425 540 aaKnown RBP11.44□□□□□ -0.58
CCDC40-205ENST00000571028 TAF13Q15543 124 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 C3orf36Q3SXR2 165 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 SLC35D3Q5M8T2 416 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 ELFN2Q5R3F8 820 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 NXNL2Q5VZ03 156 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 SHFQ7M4L6 423 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 DPY19L4Q7Z388 723 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 GID4Q8IVV7 300 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 MUC15Q8N387 334 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 IL17RDQ8NFM7 739 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 SGMS2Q8NHU3 365 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 THEM6Q8WUY1 208 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 POM121L2Q96KW2 1035 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 RDH12Q96NR8 316 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 APOL4Q9BPW4 351 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 TTTY10Q9BZA0 68 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 C1orf198Q9H425 327 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 CYB5R1Q9UHQ9 305 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 KCNG2Q9UJ96 466 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 FZR1Q9UM11 496 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 SPEF1Q9Y4P9 236 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 N6AMT1Q9Y5N5 214 aa11.44□□□□□ -0.58
CCDC40-205ENST00000571028 F5H5K5 113 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 ENTPD6O75354 484 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 ZNF35P13682 527 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 THBS4P35443 961 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 ATP6V1E1P36543 226 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 AQP4P55087 323 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 ERVS71-1P61550 626 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 RIPK1Q13546 671 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 TIGD4Q8IY51 512 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 OR4F15Q8NGB8 312 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 OR51G2Q8NGK0 314 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 MSI2Q96DH6 328 aaKnown RBP11.43□□□□□ -0.58
CCDC40-205ENST00000571028 MAP6Q96JE9 813 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 TBX5Q99593 518 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 DHRS9Q9BPW9 319 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 PIMREGQ9BSJ6 248 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 COPS4Q9BT78 406 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 WACQ9BTA9 647 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 CLN6Q9NWW5 311 aa11.43□□□□□ -0.58
CCDC40-205ENST00000571028 H7C417 338 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 SLC16A6O15403 523 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 SYNGR3O43761 229 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 TGFAP01135 160 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 NR4A1P22736 598 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 PRKXP51817 358 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 EFNA4P52798 201 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 ACTG1P63261 375 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 HIST1H3AP68431 136 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 SPATA46Q5T0L3 261 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 HIST2H3PS2Q5TEC6 136 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 TTC23Q5W5X9 447 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 HIST2H3AQ71DI3 136 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 SLC16A9Q7RTY1 509 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 ENTHD1Q8IYW4 607 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-205ENST00000571028 C3orf56Q8N813 242 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 OR10S1Q8NGN2 331 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 OR1J1Q8NGS3 322 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 ABHD4Q8TB40 342 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 SLAMF6Q96DU3 332 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 C1orf159Q96HA4 380 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 C4orf45Q96LM5 186 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 CNN2Q99439 309 aaKnown RBP11.42□□□□□ -0.58
CCDC40-205ENST00000571028 ATF6BQ99941 703 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 ABHD6Q9BV23 337 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 ADI1Q9BV57 179 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 HDHD2Q9H0R4 259 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 VCX3BQ9H321 246 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 MARCH7Q9H992 704 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 CA10Q9NS85 328 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 LAMP5Q9UJQ1 280 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 KLHDC2Q9Y2U9 406 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 PMF1-BGLAPU3KQ54 211 aa11.42□□□□□ -0.58
CCDC40-205ENST00000571028 OR6C6A6NF89 314 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 SLC22A31A6NKX4 558 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 VSTM5A8MXK1 200 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 E9PQ18 207 aa11.41□□□□□ -0.58
CCDC40-205ENST00000571028 PSMD9O00233 223 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms