RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 RAB1BQ9H0U4 201 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 TMEM160Q9NX00 188 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 HAO2Q9NYQ3 351 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 FBXL3Q9UKT7 428 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 CMAHPQ9Y471 501 aa12.98□□□□□ -0.33
RAB40B-203ENST00000570676 CUBNO60494 3623 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 SELENOFO60613 162 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 APOL3O95236 402 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 TFP02787 698 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 MRPL3P09001 348 aaKnown RBP12.97□□□□□ -0.33
RAB40B-203ENST00000570676 CCDC159P0C7I6 412 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 OR8G3PP0DMU2 310 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF823P16415 610 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 GLRXP35754 106 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 NAA10P41227 235 aaPredicted RBP12.97□□□□□ -0.33
RAB40B-203ENST00000570676 MRPS34P82930 218 aaKnown RBP12.97□□□□□ -0.33
RAB40B-203ENST00000570676 POU4F2Q12837 409 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 CARTPTQ16568 116 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 MEP1BQ16820 701 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 NRN1LQ496H8 165 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 ERI1Q8IV48 349 aaKnown RBP12.97□□□□□ -0.33
RAB40B-203ENST00000570676 OR51G2Q8NGK0 314 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 NEU4Q8WWR8 484 aaPredicted RBP12.97□□□□□ -0.33
RAB40B-203ENST00000570676 C11orf40Q8WZ69 217 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 LGALS12Q96DT0 336 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 INTS14Q96SY0 518 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 CNN2Q99439 309 aaKnown RBP12.97□□□□□ -0.33
RAB40B-203ENST00000570676 SH3GL3Q99963 347 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 WDR76Q9H967 626 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 MARCH7Q9H992 704 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 ADGRL4Q9HBW9 690 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 DYNLRB1Q9NP97 96 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 POLE4Q9NR33 117 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 MRPL22Q9NWU5 206 aaKnown RBP12.97□□□□□ -0.33
RAB40B-203ENST00000570676 PSORS1C1Q9UIG5 152 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 TPRKBQ9Y3C4 175 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 COMMD3-BMI1R4GMX3 469 aa12.97□□□□□ -0.33
RAB40B-203ENST00000570676 EFCAB10A6NFE3 127 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 PTGES3LE9PB15 166 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 SERPINA5P05154 406 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 SCG5P05408 212 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 MSR1P21757 451 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 CRHBPP24387 322 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 GIFP27352 417 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 SLC15A1P46059 708 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 EVX1P49640 407 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 CHN2P52757 468 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 KCNMB1Q16558 191 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 CHRFAM7AQ494W8 412 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 KLHL22Q53GT1 634 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 CYB5R2Q6BCY4 276 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 AHSA2Q719I0 299 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 SHFQ7M4L6 423 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 TIGD4Q8IY51 512 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 PAQR4Q8N4S7 273 aaPredicted RBP12.96□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF540Q8NDQ6 660 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 GGHQ92820 318 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 NABP1Q96AH0 204 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 YTHDF1Q9BYJ9 559 aaKnown RBP12.96□□□□□ -0.33
RAB40B-203ENST00000570676 TPK1Q9H3S4 243 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 SIAEQ9HAT2 523 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 EMC7Q9NPA0 242 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.33
RAB40B-203ENST00000570676 CNOT2Q9NZN8 540 aaKnown RBP12.96□□□□□ -0.33
RAB40B-203ENST00000570676 MYEF2Q9P2K5 600 aaKnown RBP12.96□□□□□ -0.33
RAB40B-203ENST00000570676 BLOC1S6Q9UL45 172 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 MYRFQ9Y2G1 1151 aa12.96□□□□□ -0.33
RAB40B-203ENST00000570676 IRGMA1A4Y4 181 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 VSTM5A8MXK1 200 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 M0R233 179 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 ZNF593O00488 134 aaPredicted RBP12.95□□□□□ -0.34
RAB40B-203ENST00000570676 FARS2O95363 451 aaKnown RBP12.95□□□□□ -0.34
RAB40B-203ENST00000570676 ADRA2AP08913 450 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 MMP7P09237 267 aaPredicted RBP12.95□□□□□ -0.34
RAB40B-203ENST00000570676 SPARCP09486 303 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 SBK2P0C263 348 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 PIPP12273 146 aaPredicted RBP12.95□□□□□ -0.34
RAB40B-203ENST00000570676 DAOP14920 347 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 GZMKP49863 264 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 ENTPD1P49961 510 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 RPS23P62266 143 aaKnown RBP12.95□□□□□ -0.34
RAB40B-203ENST00000570676 GALK2Q01415 458 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 RAB40BQ12829 278 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 SLC16A9Q7RTY1 509 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 LRP11Q86VZ4 500 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 LRRC18Q8N456 261 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 SLC30A7Q8NEW0 376 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 OR52I1Q8NGK6 324 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 OR6N2Q8NGY6 317 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 IPCEF1Q8WWN9 437 aaPredicted RBP12.95□□□□□ -0.34
RAB40B-203ENST00000570676 NR1H4Q96RI1 486 aaPredicted RBP12.95□□□□□ -0.34
RAB40B-203ENST00000570676 SYT3Q9BQG1 590 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 COPS4Q9BT78 406 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 SOX7Q9BT81 388 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 CDADC1Q9BWV3 514 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 EXOGQ9Y2C4 368 aaKnown RBP12.95□□□□□ -0.34
RAB40B-203ENST00000570676 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 SPEF1Q9Y4P9 236 aa12.95□□□□□ -0.34
RAB40B-203ENST00000570676 SYNGR3O43761 229 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms