RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 C12orf54Q6X4T0 127 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 DPY19L2P2Q6ZN68 376 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 ADCK1Q86TW2 530 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 LRRC28Q86X40 367 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 BCL6BQ8N143 479 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 OR6V1Q8N148 313 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 SLC26A10Q8NG04 563 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNF420Q8TAQ5 688 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 SAMD8Q96LT4 415 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 OR2V2Q96R30 315 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 THTPAQ9BU02 230 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 C1QTNF5Q9BXJ0 243 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 CADM1Q9BY67 442 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 PLA2G12AQ9BZM1 189 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 FN3KQ9H479 309 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 WDR76Q9H967 626 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 PATZ1Q9HBE1 687 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 GCM1Q9NP62 436 aa11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 PNRC2Q9NPJ4 139 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 SOX21Q9Y651 276 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-211ENST00000569653 TCRBV5S2A0A599 114 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 C5orf63A6NC05 138 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 TMEM178BH3BS89 294 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 ACOT8O14734 319 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 GSC2O15499 205 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 RAC2P15153 192 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNF12P17014 697 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 FPR3P25089 353 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 SLC6A9P48067 706 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 PAX2Q02962 417 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 SLC3A1Q07837 685 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 COX10Q12887 443 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 TMEM155Q4W5P6 130 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 ZMAT1Q5H9K5 638 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 FAM201AQ5SY85 155 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 SMARCD3Q6STE5 483 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 ARL9Q6T311 187 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 FBXW12Q6X9E4 464 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 NAA40Q86UY6 237 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 LINC00346Q8IVM7 164 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 LINC00471Q8N535 108 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 FANK1Q8TC84 345 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNRF4Q8WWF5 429 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 DACT3Q96B18 629 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNF48Q96MX3 618 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 ERMAPQ96PL5 475 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 NMNAT3Q96T66 252 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 OR52D1Q9H346 318 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNF69Q9UC07 566 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 IL19Q9UHD0 177 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 B9D1Q9UPM9 204 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 PPP1R3CQ9UQK1 317 aa11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 POLR3KQ9Y2Y1 108 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-211ENST00000569653 PPIAL4EA0A075B759 164 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 PPIAL4CA0A0B4J2A2 164 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 A0A1B0GWJ7 208 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 OR6C68A6NDL8 312 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 CEACAM18A8MTB9 384 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 A8MXK9 166 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 PPIAL4DF5H284 164 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 DNAJC8O75937 253 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 PPIAL4FP0DN26 164 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 HIST1H1CP16403 213 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 GGT2P36268 569 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 RPS6KA3P51812 740 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 ACTG1P63261 375 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 TRAP1Q12931 704 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 SLC18B1Q6NT16 456 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 LEG1Q6P5S2 330 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 COLCA1Q6ZS62 124 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 OR10S1Q8NGN2 331 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 OR4K13Q8NH42 304 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 NANPQ8TBE9 248 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 PTP4A1Q93096 173 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 MEGF10Q96KG7 1140 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 MRPL22Q9NWU5 206 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 ATPIF1Q9UII2 106 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 LYVE1Q9Y5Y7 322 aa11.61□□□□□ -0.55
GTF3C1-211ENST00000569653 F5H5P2 479 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 TNFRSF11BO00300 401 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 ARPC3O15145 178 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 FOXH1O75593 365 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 CYB5R3P00387 301 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 HLA-DPB1P04440 258 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 ACSM4P0C7M7 580 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 RAP2AP10114 183 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 HOXB6P17509 224 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 TUBG1P23258 451 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 GATA3P23771 443 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 SLC6A6P31641 620 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 CD80P33681 288 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 RPS27P42677 84 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 GSSP48637 474 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 UBA52P62987 128 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 ZNF154Q13106 437 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 RFX4Q33E94 735 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 LYPD4Q6UWN0 246 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 ASRGL1Q7L266 308 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 SIGLECL1Q8N7X8 197 aa11.6□□□□□ -0.55
GTF3C1-211ENST00000569653 BHLHE23Q8NDY6 225 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms