RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 COLCA1Q6ZS62 124 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 KLHL36Q8N4N3 616 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 OR52H1Q8NGJ2 320 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 SIGLEC11Q96RL6 698 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 AMELYQ99218 206 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 TBX5Q99593 518 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 ZNF649Q9BS31 505 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 MOB1AQ9H8S9 216 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 SLCO1C1Q9NYB5 712 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 PLEKHB1Q9UF11 243 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-212ENST00000569575 ZNF391Q9UJN7 358 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 RNF115Q9Y4L5 304 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 LRP12Q9Y561 859 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 ICE1Q9Y2F5 2266 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 A1L4Q6 167 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 F5H5K5 113 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 ABCD4O14678 606 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 CELA3BP08861 270 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 ACSM4P0C7M7 580 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 NR4A1P22736 598 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 EEF1B2P24534 225 aaKnown RBP20.3■□□□□ 0.84
RAB40C-212ENST00000569575 PSMA6P60900 246 aaKnown RBP20.3■□□□□ 0.84
RAB40C-212ENST00000569575 SNTB1Q13884 538 aaKnown RBP20.3■□□□□ 0.84
RAB40C-212ENST00000569575 RSPO1Q2MKA7 263 aaPredicted RBP20.3■□□□□ 0.84
RAB40C-212ENST00000569575 LRRN1Q6UXK5 716 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 LHFPL3Q86UP9 236 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 C14orf79Q96F83 325 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 DOK1Q99704 481 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 C1QTNF5Q9BXJ0 243 aa20.3■□□□□ 0.84
RAB40C-212ENST00000569575 MRM2Q9UI43 246 aaKnown RBP20.3■□□□□ 0.84
RAB40C-212ENST00000569575 ABHD16AO95870 558 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 MT-ND5P03915 603 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 GLRXP35754 106 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 UCP2P55851 309 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 CCDC58Q4VC31 144 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 FDX2Q6P4F2 183 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 ZNF283Q8N7M2 679 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 YIPF7Q8N8F6 280 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 SMAP2Q8WU79 429 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-212ENST00000569575 MND1Q9BWT6 205 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 RGCCQ9H4X1 137 aa20.29■□□□□ 0.84
RAB40C-212ENST00000569575 MYL12BO14950 172 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 CCNOP22674 350 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 C21orf33P30042 268 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-212ENST00000569575 LIPNQ5VXI9 398 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 SLC22A25Q6T423 547 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 SSX6Q7RTT6 188 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 MYPOPQ86VE0 399 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-212ENST00000569575 SVOPQ8N4V2 548 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 NANOGP1Q8N7R0 232 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 OPA3Q9H6K4 179 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 ZNF442Q9H7R0 627 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 GRIP1Q9Y3R0 1128 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 SNX5Q9Y5X3 404 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 RTTNQ86VV8 2226 aa20.28■□□□□ 0.84
RAB40C-212ENST00000569575 USP9YO00507 2555 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-212ENST00000569575 TMEM269A0A1B0GVZ9 245 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 CFL1P23528 166 aaKnown RBP20.27■□□□□ 0.84
RAB40C-212ENST00000569575 LOXP28300 417 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-212ENST00000569575 SLC6A9P48067 706 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 TGM4P49221 684 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 CX3CR1P49238 355 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 ETV1P50549 477 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 GBX2P52951 348 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-212ENST00000569575 TAS2R43P59537 309 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-212ENST00000569575 PIK3IP1Q96FE7 263 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 RHNO1Q9BSD3 238 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 PAK1IP1Q9NWT1 392 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-212ENST00000569575 GNG8Q9UK08 70 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 FBXO9Q9UK97 447 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-212ENST00000569575 R4GMQ9 66 aa20.27■□□□□ 0.84
RAB40C-212ENST00000569575 DOPEY2Q9Y3R5 2298 aa20.27■□□□□ 0.83
RAB40C-212ENST00000569575 XRCC2O43543 280 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 CALCRP30988 508 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 CCR9P51686 369 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 PRKXP51817 358 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 WNT4P56705 351 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 NKX6-1P78426 367 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-212ENST00000569575 BDH1Q02338 343 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 MVKQ03426 396 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 MALLQ13021 153 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 IRF3Q14653 427 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 SPATC1Q76KD6 591 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 C4orf36Q96KX1 117 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 BABAM2Q9NXR7 383 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 ERVK-18Q9QC07 812 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 PKDREJQ9NTG1 2253 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 CADP27708 2225 aa20.26■□□□□ 0.83
RAB40C-212ENST00000569575 J3QLW9 94 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 SIAH2O43255 324 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 SMPD2O60906 423 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 LCATP04180 440 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 DBHP09172 617 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 CCL2P13500 99 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 ZNF19P17023 458 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 SSTR2P30874 369 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 OR12D2P58182 307 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 ACSM1Q08AH1 577 aa20.25■□□□□ 0.83
RAB40C-212ENST00000569575 PRSS45Q7RTY3 260 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms