RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 A0A1W2PQL4 384 aaPredicted RBP13.88□□□□□ -0.19
USB1-215ENST00000569252 ABHD16AO95870 558 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 CCL2P13500 99 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 EEF1B2P24534 225 aaKnown RBP13.88□□□□□ -0.19
USB1-215ENST00000569252 SLC6A9P48067 706 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 RIDAP52758 137 aaKnown RBP13.88□□□□□ -0.19
USB1-215ENST00000569252 FAM220AQ7Z4H9 259 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 KCTD20Q7Z5Y7 419 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 ZNF679Q8IYX0 411 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 ZNF283Q8N7M2 679 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 OR52I1Q8NGK6 324 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 ST7LQ8TDW4 575 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 RNF133Q8WVZ7 376 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 GGHQ92820 318 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 POM121L2Q96KW2 1035 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 C4orf45Q96LM5 186 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 COG8Q96MW5 612 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 ZNF75AQ96N20 296 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 LRRC42Q9Y546 428 aa13.88□□□□□ -0.19
USB1-215ENST00000569252 IGHV2OR16-5A0A0B4J2B6 119 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 DEFB108AA8MXU0 73 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 XPNPEP2O43895 674 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 CCDC159P0C7I6 412 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 ZNF35P13682 527 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 PCSK6P29122 969 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 RGS6P49758 472 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 SELENOVP59797 346 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 RPS23P62266 143 aaKnown RBP13.87□□□□□ -0.19
USB1-215ENST00000569252 ACTA2P62736 377 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 ACTG2P63267 376 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 ST3GAL4Q11206 333 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 ADAM5Q6NVV9 412 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 ZNF544Q6NX49 715 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 LRRN1Q6UXK5 716 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 TMPRSS11AQ6ZMR5 421 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 YIPF7Q8N8F6 280 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 SMR3AQ99954 134 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 BCL2L14Q9BZR8 327 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 FGF20Q9NP95 211 aaPredicted RBP13.87□□□□□ -0.19
USB1-215ENST00000569252 DDX28Q9NUL7 540 aaKnown RBP13.87□□□□□ -0.19
USB1-215ENST00000569252 PSORS1C1Q9UIG5 152 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 PLEKHA6Q9Y2H5 1048 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 EXOSC1Q9Y3B2 195 aaKnown RBP13.87□□□□□ -0.19
USB1-215ENST00000569252 N6AMT1Q9Y5N5 214 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 ABCA2Q9BZC7 2435 aa13.87□□□□□ -0.19
USB1-215ENST00000569252 LOC100509620A0A075B734 347 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 METTL15A6NJ78 407 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 M0R135 149 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 SLC1A7O00341 560 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 SULT1C4O75897 302 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 LCATP04180 440 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 LCKP06239 509 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 ANXA2P07355 339 aaKnown RBP13.86□□□□□ -0.19
USB1-215ENST00000569252 PIPP12273 146 aaPredicted RBP13.86□□□□□ -0.19
USB1-215ENST00000569252 PRKXP51817 358 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 UCP2P55851 309 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 MALLQ13021 153 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 DRAM2Q6UX65 266 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 ZNF704Q6ZNC4 412 aaPredicted RBP13.86□□□□□ -0.19
USB1-215ENST00000569252 AHSA2Q719I0 299 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 LHFPL3Q86UP9 236 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 SLC7A6Q92536 515 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 ZNF799Q96GE5 643 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 OR8B4Q96RC9 309 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 YTHDF1Q9BYJ9 559 aaKnown RBP13.86□□□□□ -0.19
USB1-215ENST00000569252 PNRC2Q9NPJ4 139 aaKnown RBP13.86□□□□□ -0.19
USB1-215ENST00000569252 SLCO1C1Q9NYB5 712 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 COPS3Q9UNS2 423 aa13.86□□□□□ -0.19
USB1-215ENST00000569252 ATP6V1G2-DDX39BF2Z307 99 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 J3QLW9 94 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 PSMD9O00233 223 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 DBHP09172 617 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 FAM157BP0CG42 384 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 ZNF19P17023 458 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 NR4A1P22736 598 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 TUBG1P23258 451 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 CALCRP30988 508 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 OPRL1P41146 370 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 CX3CR1P49238 355 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 ROM1Q03395 351 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 GALEQ14376 348 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 ZNF829Q3KNS6 432 aaPredicted RBP13.85□□□□□ -0.19
USB1-215ENST00000569252 VHLLQ6RSH7 139 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 TGIF2LYQ8IUE0 185 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 EGFL6Q8IUX8 553 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 OR1J1Q8NGS3 322 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 ABHD4Q8TB40 342 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 APOBEC3DQ96AK3 386 aaPredicted RBP13.85□□□□□ -0.19
USB1-215ENST00000569252 AMELYQ99218 206 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 ALG8Q9BVK2 526 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 TTTY10Q9BZA0 68 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 CCDC90BQ9GZT6 254 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 CLEC4MQ9H2X3 399 aaPredicted RBP13.85□□□□□ -0.19
USB1-215ENST00000569252 OR51B6Q9H340 312 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 TUBG2Q9NRH3 451 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 FAIMQ9NVQ4 179 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 TBCCD1Q9NVR7 557 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 CISD1Q9NZ45 108 aaKnown RBP13.85□□□□□ -0.19
USB1-215ENST00000569252 GNG8Q9UK08 70 aa13.85□□□□□ -0.19
USB1-215ENST00000569252 EDARQ9UNE0 448 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms