RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SPAG7O75391 227 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 MT-ND1P03886 318 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 ALDOBP05062 364 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 ALDOCP09972 364 aaKnown RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 FAM153BP0C7A2 387 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 PF4V1P10720 104 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 ZNF26P17031 533 aaPredicted RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 MSX2P35548 267 aaPredicted RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 AQP2P41181 271 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 RBM34P42696 430 aaKnown RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 SLC1A6P48664 564 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 POLR2JP52435 117 aaKnown RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 RPL27P61353 136 aaKnown RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 BLMHQ13867 455 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 SCARB2Q14108 478 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 ENDOGQ14249 297 aaKnown RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 SFRP4Q6FHJ7 346 aaPredicted RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 EIF1ADQ8N9N8 165 aaKnown RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 OR51G2Q8NGK0 314 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 PPP1R35Q8TAP8 253 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 LIPHQ8WWY8 451 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 ST8SIA4Q92187 359 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 HDAC2Q92769 488 aaKnown RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 VPS33AQ96AX1 596 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 SGTBQ96EQ0 304 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 SSX3Q99909 188 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 ECSITQ9BQ95 431 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 ZNF426Q9BUY5 554 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 CDCA4Q9BXL8 241 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 TMEM38AQ9H6F2 299 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 POLE4Q9NR33 117 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 CTSZQ9UBR2 303 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 SLC7A7Q9UM01 511 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 ANGPT4Q9Y264 503 aa7.1□□□□□ -1.27
SMG1-216ENST00000569122 SF3B6Q9Y3B4 125 aaKnown RBP7.1□□□□□ -1.27
SMG1-216ENST00000569122 TANC2Q9HCD6 1990 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 COL7A1Q02388 2944 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 IGKV1D-43A0A0B4J1Z2 117 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 IGHV3-64DA0A0J9YX35 117 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 WI2-2373I1.2A0A1W2PRP0 233 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 EVPLLA8MZ36 301 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 H3BUI4 141 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 AHCYL1O43865 530 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 OR7A10O76100 309 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 PF4P02776 101 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 OPN1SWP03999 348 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 CD28P10747 220 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 CD247P20963 164 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 BGNP21810 368 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 LMO1P25800 156 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 SAA4P35542 130 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 FMODQ06828 376 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 EGFEM1PQ0D2K5 195 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 MALLQ13021 153 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 MAB21L1Q13394 359 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 AQP6Q13520 282 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 LRRC75BQ2VPJ9 315 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 GTDC1Q4AE62 458 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 ALG10Q5BKT4 473 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 CLEC12AQ5QGZ9 265 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 ZBTB37Q5TC79 503 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 SLC36A1Q7Z2H8 476 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 COMTD1Q86VU5 262 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 LYG1Q8N1E2 194 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 LY6G5BQ8NDX9 201 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 OR1F12Q8NHA8 337 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 GTF2H4Q92759 462 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 CITED2Q99967 270 aaPredicted RBP7.09□□□□□ -1.27
SMG1-216ENST00000569122 DCTN5Q9BTE1 182 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 METTL8Q9H825 291 aaKnown RBP7.09□□□□□ -1.27
SMG1-216ENST00000569122 PTTG3PQ9NZH4 202 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 PCDHGB5Q9Y5G0 923 aa7.09□□□□□ -1.27
SMG1-216ENST00000569122 WDR91A4D1P6 747 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 M0R3H8 397 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 SDHDO14521 159 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 HDAC3O15379 428 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 GMDSO60547 372 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 GYPAP02724 150 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 TSPAN19P0C672 248 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 MUC1P15941 1255 aaPredicted RBP7.08□□□□□ -1.28
SMG1-216ENST00000569122 GRK5P34947 590 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 ERFP50548 548 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 LSM6P62312 80 aaKnown RBP7.08□□□□□ -1.28
SMG1-216ENST00000569122 STX3Q13277 289 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 OR8G1Q15617 311 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 MICBQ29980 383 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 BEND6Q5SZJ8 279 aaPredicted RBP7.08□□□□□ -1.28
SMG1-216ENST00000569122 UNQ9370/PRO34162Q6UXP9 181 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 RNF144BQ7Z419 303 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 BOLLQ8N9W6 283 aaKnown RBP7.08□□□□□ -1.28
SMG1-216ENST00000569122 SMYD1Q8NB12 490 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 BHLHE23Q8NDY6 225 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 C19orf18Q8NEA5 215 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 OR6T1Q8NGN1 323 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 LRRC8CQ8TDW0 803 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 SPRYD4Q8WW59 207 aaPredicted RBP7.08□□□□□ -1.28
SMG1-216ENST00000569122 RASSF5Q8WWW0 418 aa7.08□□□□□ -1.28
SMG1-216ENST00000569122 POLR2J2Q9GZM3 115 aaKnown RBP7.08□□□□□ -1.28
SMG1-216ENST00000569122 PAIP1Q9H074 479 aaKnown RBP7.08□□□□□ -1.28
SMG1-216ENST00000569122 POLR2J3Q9H1A7 115 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms