RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 APOBEC3DQ96AK3 386 aaPredicted RBP12.95□□□□□ -0.34
NME3-211ENST00000568561 OR8B2Q96RD0 313 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 SLC30A2Q9BRI3 323 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 NUDT16L1Q9BRJ7 211 aaKnown RBP12.95□□□□□ -0.34
NME3-211ENST00000568561 MARCH7Q9H992 704 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 NMNAT1Q9HAN9 279 aaPredicted RBP12.95□□□□□ -0.34
NME3-211ENST00000568561 NRIP3Q9NQ35 241 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 VSX1Q9NZR4 365 aaPredicted RBP12.95□□□□□ -0.34
NME3-211ENST00000568561 MIOXQ9UGB7 285 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 RPS6KA6Q9UK32 745 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 IER3IP1Q9Y5U9 82 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 LHFPL6Q9Y693 200 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 CAPN7Q9Y6W3 813 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 FAM181BA6NEQ2 426 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 C22orf46C9J442 243 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 IFNL4K9M1U5 179 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 DCTN6O00399 190 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 NME4O00746 187 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 GSTA4O15217 222 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 AHCYL1O43865 530 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 PPIAL4GP0DN37 164 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 TROVE2P10155 538 aaKnown RBP eCLIP12.94□□□□□ -0.34
NME3-211ENST00000568561 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 FGD3Q5JSP0 725 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 PRAMEF6Q5VXH4 476 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 C16orf87Q6PH81 154 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 CBLL1Q75N03 491 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 RRM2BQ7LG56 351 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 SLC15A3Q8IY34 581 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 FITM2Q8N6M3 262 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 OR5L1Q8NGL2 311 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
NME3-211ENST00000568561 PLEKHA8Q96JA3 519 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 NDEL1Q9GZM8 345 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 SLITRK2Q9H156 845 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 CLN8Q9UBY8 286 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 SIGLEC7Q9Y286 467 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 TMEM5Q9Y2B1 443 aa12.94□□□□□ -0.34
NME3-211ENST00000568561 KIR2DS1A0A191URI9 304 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 LRRC30A6NM36 301 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 IQCF6A8MYZ5 107 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 J3QW42 95 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 PTP4A3O75365 173 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 SFTPBP07988 381 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 NCK1P16333 377 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 FPR3P25089 353 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 CDKN2AP42771 156 aaKnown RBP12.93□□□□□ -0.34
NME3-211ENST00000568561 SLC7A2P52569 658 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 RSPO1Q2MKA7 263 aaPredicted RBP12.93□□□□□ -0.34
NME3-211ENST00000568561 WDR25Q64LD2 544 aaPredicted RBP12.93□□□□□ -0.34
NME3-211ENST00000568561 GPR139Q6DWJ6 353 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 NLRC3Q7RTR2 1065 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 LINC00346Q8IVM7 164 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 KIR3DL3Q8N743 410 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 WFDC12Q8WWY7 111 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 COQ7Q99807 217 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 PCGF1Q9BSM1 259 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 HDHD2Q9H0R4 259 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 UFSP2Q9NUQ7 469 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 ATPIF1Q9UII2 106 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 TMCC3Q9ULS5 477 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 ENPP4Q9Y6X5 453 aa12.93□□□□□ -0.34
NME3-211ENST00000568561 TRBV4-1A0A0J9YWV2 114 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 FAM20BO75063 409 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 PPP1R3DO95685 299 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 GSK3BP49841 420 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 RAG2P55895 527 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 HIST1H3AP68431 136 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 MAB21L1Q13394 359 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 SEC23BQ15437 767 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 MPPED2Q15777 294 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 KCNMB1Q16558 191 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 ZNF181Q2M3W8 571 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 HIST2H3PS2Q5TEC6 136 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 FIP1L1Q6UN15 594 aaKnown RBP12.92□□□□□ -0.34
NME3-211ENST00000568561 CFAP77Q6ZQR2 320 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 HIST2H3AQ71DI3 136 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 ADCK1Q86TW2 530 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 CYP4Z1Q86W10 505 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 BOLLQ8N9W6 283 aaKnown RBP12.92□□□□□ -0.34
NME3-211ENST00000568561 GJC3Q8NFK1 279 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 GPX7Q96SL4 187 aaPredicted RBP12.92□□□□□ -0.34
NME3-211ENST00000568561 MMADHCQ9H3L0 296 aaPredicted RBP12.92□□□□□ -0.34
NME3-211ENST00000568561 TMEM100Q9NV29 134 aa12.92□□□□□ -0.34
NME3-211ENST00000568561 PDP1Q9P0J1 537 aaPredicted RBP12.92□□□□□ -0.34
NME3-211ENST00000568561 IGLV1-36A0A0B4J1U3 117 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 UNC119BA6NIH7 251 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 SRRM5B3KS81 715 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 DIRAS1O95057 198 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 KNG1P01042 644 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 H1F0P07305 194 aaKnown RBP12.91□□□□□ -0.34
NME3-211ENST00000568561 IRF2P14316 349 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 OMPP47874 163 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 RELBQ01201 579 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 GK2Q14410 553 aaPredicted RBP12.91□□□□□ -0.34
NME3-211ENST00000568561 CLEC12AQ5QGZ9 265 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 GPR157Q5UAW9 335 aa12.91□□□□□ -0.34
NME3-211ENST00000568561 ZNF841Q6ZN19 808 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms