RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 KPNA3O00505 521 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF264O43296 627 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 TRAF3IP2O43734 574 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 BCAS1O75363 584 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 SNAPC5O75971 98 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 SUPT7LO94864 414 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 PLEKP08567 350 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 HOXC4P09017 264 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ZDHHC11BP0C7U3 371 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 NPIPA8P0DM63 369 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 NR2C1P13056 603 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 TNNI3P19429 210 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 HNF1AP20823 631 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 RORAP35398 523 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 DLSTP36957 453 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CTRLP40313 264 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CDKN1BP46527 198 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 RAB13P51153 203 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 NAPAP54920 295 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 TAS2R60P59551 318 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 NAA20P61599 178 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ARF6P62330 175 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 EWSR1Q01844 656 aaKnown RBP eCLIP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 TLE4Q04727 773 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ORC2Q13416 577 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 GPR176Q14439 515 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ITIH4Q14624 930 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNHIT3Q15649 155 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 TOMM34Q15785 309 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 DUSP7Q16829 419 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 NDUFAF6Q330K2 333 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 HSDL1Q3SXM5 330 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CHRFAM7AQ494W8 412 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 COQ5Q5HYK3 327 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 RABGAP1LQ5R372 815 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 MARCH8Q5T0T0 291 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 GPR107Q5VW38 600 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 MLIPQ5VWP3 458 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CARD17Q5XLA6 110 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 LRRC66Q68CR7 880 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 DUPD1Q68J44 220 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 OR52E8Q6IFG1 317 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 C5orf46Q6UWT4 87 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ARSKQ6UWY0 536 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 UNQ9370/PRO34162Q6UXP9 181 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 DNM1P46Q6ZS02 220 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 SSX9Q7RTT3 188 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 LRRC8AQ8IWT6 810 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF679Q8IYX0 411 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 SLC38A6Q8IZM9 456 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 MREGQ8N565 214 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 C15orf54Q8N8G6 183 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ASCC1Q8N9N2 400 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 LINC01555Q8NAE3 123 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CATSPER1Q8NEC5 780 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 OR2L8Q8NGY9 312 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 UBA3Q8TBC4 463 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 PHOSPHO2Q8TCD6 241 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 LKAAEAR1Q8TD35 194 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 DTX3LQ8TDB6 740 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 TCP10LQ8TDR4 215 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 DTD1Q8TEA8 209 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 AENQ8WTP8 325 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 FAM172AQ8WUF8 416 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ELMO1Q92556 727 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 DCPSQ96C86 337 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CCDC124Q96CT7 223 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 AKR1E2Q96JD6 320 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 SLC35E1Q96K37 410 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 C12orf57Q99622 126 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 C11orf70Q9BRQ4 267 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 COPS4Q9BT78 406 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ZSCAN5AQ9BUG6 496 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 RAB33BQ9H082 229 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 LRRN3Q9H3W5 708 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 RGCCQ9H4X1 137 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ETNK2Q9NVF9 386 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 IFNKQ9P0W0 207 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ENOPH1Q9UHY7 261 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 GSTK1Q9Y2Q3 226 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 MFHAS1Q9Y4C4 1052 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 POLR3HQ9Y535 204 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 PUS1Q9Y606 427 aaKnown RBP eCLIP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 U3KQV3 271 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CHD9Q3L8U1 2897 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNFX1Q9P2E3 1918 aaKnown RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 MYH13Q9UKX3 1938 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CFAP54Q96N23 3096 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 MROH7Q68CQ1 1323 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 EP300Q09472 2414 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 A0A087WZY1 265 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 A0A0G2JRQ6 117 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 A0A0U1RQS6 177 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 A0A1B0GW55 424 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 FAM92AA1XBS5 289 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 A6NIZ1 184 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF729A6NN14 1252 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF716A6NP11 495 aa2.47□□□□□ -2.01
HERPUD1-212ENST00000567944 SUPT3HB4E1H0 165 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms