RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 DCAF7P61962 342 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 TIAL1Q01085 375 aaKnown RBP eCLIP11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 FAM58AQ8N1B3 248 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 ARIH2OSQ8N7S6 290 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 GNPNAT1Q96EK6 184 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 UHRF2Q96PU4 802 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 GAS2L1Q99501 681 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 PPP1R3EQ9H7J1 279 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC23A2Q9UGH3 650 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 OPN4Q9UHM6 478 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 BTBD17A6NE02 478 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 PCBP3P57721 371 aaKnown RBP11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 EGR3Q06889 387 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 MPPED2Q15777 294 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 PHYHIPLQ96FC7 376 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 PCM1Q15154 2024 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 ANKRD20A5PA0PJZ0 165 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 SMIM6P0DI80 62 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 CCL5P13501 91 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 HTR5AP47898 357 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 DVL1P1P54792 670 aaPredicted RBP11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 MLC1Q15049 377 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 ETFDHQ16134 617 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF528Q3MIS6 628 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR2A2Q6IF42 318 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 BHLHA9Q7RTU4 235 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 NUBPLQ8TB37 319 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 MITD1Q8WV92 249 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 TVP23CQ96ET8 276 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC6A18Q96N87 628 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 ARHGDIGQ99819 225 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 KLF15Q9UIH9 416 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 SIGLEC7Q9Y286 467 aa11.26□□□□□ -0.61
CSPG4P13-202ENST00000567704 FFAR1O14842 300 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 P04436 131 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 FGF7P21781 194 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 IL2RGP31785 369 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 RPP30P78346 268 aaKnown RBP11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 NR0B2Q15466 257 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 DMRTC1Q5HYR2 192 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 FAM199XQ6PEV8 388 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 RP1P56715 2156 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 LOC102725191A0A1B0GVB3 256 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 AP4M1O00189 453 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 SIGLEC5O15389 551 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 PRKNO60260 465 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 ARG1P05089 322 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 DAOP14920 347 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 TBPP20226 339 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 RFC3P40938 356 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 SIGLEC14Q08ET2 396 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 KIRREL2Q6UWL6 708 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 RNF165Q6ZSG1 346 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 BATF2Q8N1L9 274 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 MAGT1Q9H0U3 335 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 C11orf49Q9H6J7 331 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 FKRPQ9H9S5 495 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 CCL27Q9Y4X3 112 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 TRIP11Q15643 1979 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 BLACEA4D250 179 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 C2orf72A6NCS6 295 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMEM127O75204 238 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 APOA2P02652 100 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 ADRA2CP18825 462 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 ACKR3P25106 362 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 LAIR1Q6GTX8 287 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 CD300LDQ6UXZ3 194 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 STPG2Q8N412 459 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 OR51H1Q8NH63 302 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 RARRES3Q9UL19 164 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 ECM29Q5VYK3 1845 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A1W2PPH5 198 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 MED19A0JLT2 244 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 C7orf66A4D0T2 115 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 CBY3A6NI87 242 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 ANKRD30BLA7E2S9 258 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 HSD17B6O14756 317 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 SSSCA1O60232 199 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 CALCRP30988 508 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF133P52736 654 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 RTN4RL1Q86UN2 441 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 GPR119Q8TDV5 335 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 SLC46A1Q96NT5 459 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 CUTCQ9NTM9 273 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 CTSFQ9UBX1 484 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 PIGLQ9Y2B2 252 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 KIAA1551Q9HCM1 1747 aa11.25□□□□□ -0.61
CSPG4P13-202ENST00000567704 hCG_1809904A0A1W2PP81 198 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A1W2PR64 198 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 A0A1W2PRV1 198 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 FAM221AA4D161 298 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 C17orf112F2Z3M2 114 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 TMEM268Q5VZI3 342 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 C15orf54Q8N8G6 183 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 PTP4A1Q93096 173 aa11.24□□□□□ -0.61
CSPG4P13-202ENST00000567704 TSLPQ969D9 159 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms