RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ZNF696Q9H7X3 374 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 TMEM100Q9NV29 134 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 LHFPL6Q9Y693 200 aa12.57□□□□□ -0.4
RNF40-209ENST00000566703 ANK2Q01484 3957 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 IGLV1-36A0A0B4J1U3 117 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 TRBV4-1A0A0J9YWV2 114 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 POM121CA8CG34 1229 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 GMNNO75496 209 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 PSME3P61289 254 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 COX10Q12887 443 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 BAMBIQ13145 260 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 HNRNPA0Q13151 305 aaKnown RBP12.56□□□□□ -0.4
RNF40-209ENST00000566703 HLXQ14774 488 aaPredicted RBP12.56□□□□□ -0.4
RNF40-209ENST00000566703 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
RNF40-209ENST00000566703 RFX4Q33E94 735 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 KRTAP27-1Q3LI81 207 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 SLC36A3Q495N2 470 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 PRR31Q5SQ13 230 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 KLBQ86Z14 1044 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 BCL6BQ8N143 479 aaPredicted RBP12.56□□□□□ -0.4
RNF40-209ENST00000566703 OR6V1Q8N148 313 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 UPRTQ96BW1 309 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 ERMAPQ96PL5 475 aaPredicted RBP12.56□□□□□ -0.4
RNF40-209ENST00000566703 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 GORASP2Q9H8Y8 452 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 PCDHGB1Q9Y5G3 927 aa12.56□□□□□ -0.4
RNF40-209ENST00000566703 KIR2DS1A0A191URI9 304 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 DNAJC9-AS1A6NH13 148 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 IDH3BO43837 385 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 CYB5R3P00387 301 aaPredicted RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 RENP00797 406 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 RNASE1P07998 156 aaKnown RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 RPS2P15880 293 aaKnown RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 SLC6A6P31641 620 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 RBMXP38159 391 aaKnown RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 MDH1P40925 334 aaKnown RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 GATA4P43694 442 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 CENPAP49450 140 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 NUDT2P50583 147 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 GNB2P62879 340 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 IL13RA1P78552 427 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 SEC23BQ15437 767 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 OTPQ5XKR4 325 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 NLRC3Q7RTR2 1065 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 ZBTB46Q86UZ6 589 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 SLC26A10Q8NG04 563 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 ZNF420Q8TAQ5 688 aaPredicted RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 SLC25A28Q96A46 364 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 DACT3Q96B18 629 aaPredicted RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 C1orf147Q96MC9 270 aaPredicted RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 ZNF48Q96MX3 618 aaPredicted RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 TSSK2Q96PF2 358 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 TMEM246Q9BRR3 403 aa12.55□□□□□ -0.4
RNF40-209ENST00000566703 SRA1Q9HD15 236 aaKnown RBP12.55□□□□□ -0.4
RNF40-209ENST00000566703 IGHV2-70DA0A0C4DH43 119 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 H0YL77 283 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 DCTN6O00399 190 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 TMPRSS2O15393 492 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 MLNRO43193 412 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 PPP1R3DO95685 299 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 PLATP00750 562 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 ACSM4P0C7M7 580 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 IRF2P14316 349 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 FPR3P25089 353 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 PMELP40967 661 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 BPIFB3P59826 476 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 MALLQ13021 153 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 ZNF404Q494X3 552 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 SLC18B1Q6NT16 456 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 CORO6Q6QEF8 472 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 PARP8Q8N3A8 854 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 OR8B3Q8NGG8 313 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 Q8TCH9 128 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 PYURFQ96I23 114 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 OR8B2Q96RD0 313 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 SLC22A4Q9H015 551 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 SPAG4Q9NPE6 437 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 KCNG2Q9UJ96 466 aa12.54□□□□□ -0.4
RNF40-209ENST00000566703 NOP16Q9Y3C1 178 aaKnown RBP12.54□□□□□ -0.4
RNF40-209ENST00000566703 F5H5P2 479 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 WIPF1O43516 503 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 GADD45GO95257 159 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 GPANK1O95872 356 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 PRDX6P30041 224 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 IFNGR2P38484 337 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 SLC9A3R2Q15599 337 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 MEP1BQ16820 701 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 HSP90B2PQ58FF3 399 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 LEG1Q6P5S2 330 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 DCDC5Q6ZRR9 648 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 MOGAT3Q86VF5 341 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 JAZF1Q86VZ6 243 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 OR11L1Q8NGX0 322 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 OR2AJ1Q8NGZ0 328 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 OR52J3Q8NH60 311 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 NMNAT3Q96T66 252 aa12.53□□□□□ -0.4
RNF40-209ENST00000566703 PITX2Q99697 317 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms