RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 ELP5Q8TE02 316 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 SPACA9Q96E40 222 aaPredicted RBP8.3□□□□□ -1.08
BBS4-210ENST00000566400 DNAJA3Q96EY1 480 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 SCGB3A2Q96PL1 93 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 DEFB126Q9BYW3 111 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 B3GNT4Q9C0J1 378 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 IFT46Q9NQC8 304 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 MED29Q9NX70 200 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 GHRLQ9UBU3 117 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 CGGBP1Q9UFW8 167 aaPredicted RBP8.3□□□□□ -1.08
BBS4-210ENST00000566400 GPN3Q9UHW5 284 aaPredicted RBP8.3□□□□□ -1.08
BBS4-210ENST00000566400 B3GALT1Q9Y5Z6 326 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 ZNF726A6NNF4 738 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 C17orf51A8MQB3 221 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 H3BML4 177 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 H3BSH0 61 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 P2RY10O00398 339 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 ARPC5O15511 151 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 CD8AP01732 235 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 TTRP02766 147 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 GSTP1P09211 210 aaKnown RBP8.3□□□□□ -1.08
BBS4-210ENST00000566400 PGA4P0DJD7 388 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 PGA3P0DJD8 388 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 ZNF35P13682 527 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 ZNF43P17038 809 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 HLA-GP17693 338 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 CBX5P45973 191 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 UBE2MP61081 183 aaKnown RBP8.3□□□□□ -1.08
BBS4-210ENST00000566400 ZNF345Q14585 488 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 AANATQ16613 207 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 ZNF260Q3ZCT1 412 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 FAM69BQ5VUD6 431 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 LYSMD4Q5XG99 296 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 ZNF385CQ66K41 422 aaPredicted RBP8.3□□□□□ -1.08
BBS4-210ENST00000566400 SIGIRRQ6IA17 410 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 SHISA6Q6ZSJ9 500 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 MDGA2Q7Z553 956 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 OR4K17Q8NGC6 315 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 OR4D10Q8NGI6 311 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 OR52B4Q8NGK2 314 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 OR6K3Q8NGY3 331 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 FGGYQ96C11 551 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 WDR77Q9BQA1 342 aaPredicted RBP8.3□□□□□ -1.08
BBS4-210ENST00000566400 ARL6Q9H0F7 186 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 CNTD2Q9H8S5 307 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 RDH8Q9NYR8 311 aa8.3□□□□□ -1.08
BBS4-210ENST00000566400 EML5Q05BV3 1969 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 MPDZO75970 2070 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 ADAMTS20P59510 1910 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 FXYD6-FXYD2A0A087WZ82 144 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 hCG_1807616A0A1W2PRN6 198 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 KRBOX1C9JBD0 128 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 EIF1BO60739 113 aaKnown RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 VAMP5O95183 116 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 IFNA6P05013 189 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 IL11P20809 199 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 CD34P28906 385 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 HOXA6P31267 233 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 ZNF93P35789 620 aaPredicted RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 CLDN6P56747 220 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 H2BFSP57053 126 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 LSM6P62312 80 aaKnown RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 RPS27AP62979 156 aaKnown RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 UBA52P62987 128 aaKnown RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 HLXQ14774 488 aaPredicted RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 EXT1Q16394 746 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 PNLIPRP3Q17RR3 467 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 RTL6Q6ICC9 239 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 OPN5Q6U736 354 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 ZNF574Q6ZN55 896 aaPredicted RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 DOK3Q7L591 496 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 BEST3Q8N1M1 668 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 OR2M3Q8NG83 312 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 OR51A2Q8NGJ7 313 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 OR5M8Q8NGP6 311 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 OR5M1Q8NGP8 315 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 KCNG3Q8TAE7 436 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 THAP3Q8WTV1 239 aaPredicted RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 RBPMSQ93062 196 aaKnown RBP8.29□□□□□ -1.08
BBS4-210ENST00000566400 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 PPP1R14AQ96A00 147 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 SPSB2Q99619 263 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 MFFQ9GZY8 342 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 FXYD6Q9H0Q3 95 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 B3GAT1Q9P2W7 334 aa8.29□□□□□ -1.08
BBS4-210ENST00000566400 IGHV5-10-1A0A0J9YXX1 117 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 AQP7P3A6NL99 342 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 K7ESF4 209 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 RAB27BO00194 218 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 OR2F2O95006 317 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 CD63P08962 238 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 ZNF735P0CB33 412 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 FGF5P12034 268 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 SLC25A4P12235 298 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 MGMTP16455 207 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 CCL1P22362 96 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 PTGDSP41222 190 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 TRA2AQ13595 282 aaKnown RBP eCLIP8.28□□□□□ -1.08
BBS4-210ENST00000566400 OR2F1Q13607 317 aa8.28□□□□□ -1.08
BBS4-210ENST00000566400 SHBQ15464 509 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms