RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ZMYND11Q15326 602 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 SLC18B1Q6NT16 456 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 PGBD2Q6P3X8 592 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 COLCA1Q6ZS62 124 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 PIGWQ7Z7B1 504 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 MUC20Q8N307 709 aaPredicted RBP16.99■□□□□ 0.31
CLN6-207ENST00000566347 LINC00471Q8N535 108 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 OR52L1Q8NGH7 329 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 OR2AJ1Q8NGZ0 328 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 PITX2Q99697 317 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 ATF6BQ99941 703 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 HCAR1Q9BXC0 346 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 OPN4Q9UHM6 478 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 CYB5R1Q9UHQ9 305 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 KCNG2Q9UJ96 466 aa16.99■□□□□ 0.31
CLN6-207ENST00000566347 POLR3KQ9Y2Y1 108 aaPredicted RBP16.99■□□□□ 0.31
CLN6-207ENST00000566347 NBEAL1Q6ZS30 2694 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 OR6C68A6NDL8 312 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 IQCF6A8MYZ5 107 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 TMEM178BH3BS89 294 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 TRIM77I1YAP6 450 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 RGS9O75916 674 aaPredicted RBP16.98■□□□□ 0.31
CLN6-207ENST00000566347 HLA-DQA2P01906 255 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 CPT2P23786 658 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 ZFP36P26651 326 aaKnown RBP16.98■□□□□ 0.31
CLN6-207ENST00000566347 MMP16P51512 607 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 HNRNPA0Q13151 305 aaKnown RBP16.98■□□□□ 0.31
CLN6-207ENST00000566347 KRTAP27-1Q3LI81 207 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 C12orf54Q6X4T0 127 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 CFAP77Q6ZQR2 320 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 LINC00346Q8IVM7 164 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 BPIFB2Q8N4F0 458 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 SDR9C7Q8NEX9 313 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 OR10AD1Q8NGE0 317 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 OR52E2Q8NGJ4 325 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 MEGF10Q96KG7 1140 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 SLC30A2Q9BRI3 323 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 C1QTNF5Q9BXJ0 243 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 CDH10Q9Y6N8 788 aa16.98■□□□□ 0.31
CLN6-207ENST00000566347 A8MXK9 166 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 FSHBP01225 129 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 ACSM4P0C7M7 580 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 FPR2P25090 351 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 SLC6A9P48067 706 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 HMGA2P52926 109 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 ACTG1P63261 375 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.97■□□□□ 0.31
CLN6-207ENST00000566347 RSPO1Q2MKA7 263 aaPredicted RBP16.97■□□□□ 0.31
CLN6-207ENST00000566347 FAM216AQ8WUB2 273 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 POP5Q969H6 163 aaKnown RBP16.97■□□□□ 0.31
CLN6-207ENST00000566347 RBM4Q9BWF3 364 aaKnown RBP16.97■□□□□ 0.31
CLN6-207ENST00000566347 FN3KQ9H479 309 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 LYVE1Q9Y5Y7 322 aa16.97■□□□□ 0.31
CLN6-207ENST00000566347 F5H0A9 414 aaPredicted RBP16.96■□□□□ 0.31
CLN6-207ENST00000566347 F5H5K5 113 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 TNFRSF11BO00300 401 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 ZNF823P16415 610 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 GGT2P36268 569 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 TRAP1Q12931 704 aaKnown RBP16.96■□□□□ 0.31
CLN6-207ENST00000566347 MALLQ13021 153 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 ESCO2Q56NI9 601 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 CLEC12AQ5QGZ9 265 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 SLC35F1Q5T1Q4 408 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 BHLHE23Q8NDY6 225 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 SLC6A7Q99884 636 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 TRIM15Q9C019 465 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 EGLN3Q9H6Z9 239 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 TMEM100Q9NV29 134 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 ACTR3BQ9P1U1 418 aa16.96■□□□□ 0.31
CLN6-207ENST00000566347 A0A1B0GWJ7 208 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 LRRC30A6NM36 301 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 MLNRO43193 412 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 GYS2P54840 703 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 TPTEP56180 551 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 GK2Q14410 553 aaPredicted RBP16.95■□□□□ 0.3
CLN6-207ENST00000566347 ZNF181Q2M3W8 571 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 C1orf87Q8N0U7 546 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 DEFB108BQ8NET1 73 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 OR2T4Q8NH00 348 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 WDR76Q9H967 626 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 PNRC2Q9NPJ4 139 aaKnown RBP16.95■□□□□ 0.3
CLN6-207ENST00000566347 MMP26Q9NRE1 261 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 MRPL22Q9NWU5 206 aaKnown RBP16.95■□□□□ 0.3
CLN6-207ENST00000566347 OR5V1Q9UGF6 321 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 LRCH1Q9Y2L9 728 aa16.95■□□□□ 0.3
CLN6-207ENST00000566347 TENM1Q9UKZ4 2725 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 CEACAM18A8MTB9 384 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 H0YL77 283 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 TRAPPC2LH3BP13 241 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 BHLHE40O14503 412 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 FSTL3O95633 263 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 LCATP04180 440 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 ZNF12P17014 697 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 RBMXP38159 391 aaKnown RBP16.94■□□□□ 0.3
CLN6-207ENST00000566347 MAGEA2P43356 314 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 DBPQ10586 325 aaPredicted RBP16.94■□□□□ 0.3
CLN6-207ENST00000566347 ZNF154Q13106 437 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 ARMCX4Q5H9R4 360 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 CYP2R1Q6VVX0 501 aa16.94■□□□□ 0.3
CLN6-207ENST00000566347 ARHGAP24Q8N264 748 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms