RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 TCEANCQ8N8B7 351 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 OR6N2Q8NGY6 317 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 TMEM163Q8TC26 289 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 UBASH3BQ8TF42 649 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 SNX33Q8WV41 574 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 DCLRE1CQ96SD1 692 aaKnown RBP11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 INTS14Q96SY0 518 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 ATF6BQ99941 703 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 OR2J1Q9GZK6 312 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 TUBG2Q9NRH3 451 aa11.83□□□□□ -0.52
HERPUD1-210ENST00000565966 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 A0A096LNT2 108 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 CCDC182A6NF36 153 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ERICH4A6NGS2 130 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 C17orf100A8MU93 164 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 VWC2LB2RUY7 222 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 E9PQ18 207 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 H3BSA7 217 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 MT-ND5P03915 603 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 NAT2P11245 290 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 MPV17P39210 176 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 RAD23AP54725 363 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 RIPPLY3P57055 190 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 RPS7P62081 194 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 LOXL1Q08397 574 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ECH1Q13011 328 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 APOFQ13790 326 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 CARTPTQ16568 116 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ALKBH6Q3KRA9 238 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ZIK1Q3SY52 487 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 AADACL4Q5VUY2 407 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ZBTB49Q6ZSB9 765 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 DPY19L4Q7Z388 723 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 BCDIN3DQ7Z5W3 292 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ZNF786Q8N393 782 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ZNF540Q8NDQ6 660 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ST7LQ8TDW4 575 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 COG8Q96MW5 612 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 TEAD3Q99594 435 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 POFUT1Q9H488 388 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 STARD10Q9Y365 291 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 ORC6Q9Y5N6 252 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
HERPUD1-210ENST00000565966 NSD1Q96L73 2696 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 SELENOFO60613 162 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 ACSM4P0C7M7 580 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 ANPEPP15144 967 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 LIPAP38571 399 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 RGS6P49758 472 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 EIF2B1Q14232 305 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 RCN1Q15293 331 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 TMEM255AQ5JRV8 349 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 SHFQ7M4L6 423 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 IPCEF1Q8WWN9 437 aaPredicted RBP11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 EME1Q96AY2 570 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 SLAMF6Q96DU3 332 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 IL4I1Q96RQ9 567 aa11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 DDX28Q9NUL7 540 aaKnown RBP11.81□□□□□ -0.52
HERPUD1-210ENST00000565966 DYSFO75923 2080 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.524e-7■■■□□ 16.2
HERPUD1-210ENST00000565966 F5H5K5 113 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 J3QW42 95 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 HPXP02790 462 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 USF1P22415 310 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 GIFP27352 417 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 OTX1P32242 354 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 NAA10P41227 235 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 NR4A2P43354 598 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 PCGF3Q3KNV8 242 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 LCN1P1Q5VSP4 162 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 NXNL2Q5VZ03 156 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 COLCA1Q6ZS62 124 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 MEPCEQ7L2J0 689 aaKnown RBP11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 NAA40Q86UY6 237 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 OR5L1Q8NGL2 311 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 OTOSQ8NHW6 89 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 SPTSSAQ969W0 71 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 APOBEC3DQ96AK3 386 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 HRASLS5Q96KN8 279 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 MBOAT4Q96T53 435 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 AMELYQ99218 206 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 ABHD6Q9BV23 337 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 C1QTNF5Q9BXJ0 243 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 TOR3AQ9H497 397 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 CENPMQ9NSP4 180 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 NKIRAS2Q9NYR9 191 aa11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 H2AFY2Q9P0M6 372 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 CGGBP1Q9UFW8 167 aaPredicted RBP11.8□□□□□ -0.52
HERPUD1-210ENST00000565966 TANC2Q9HCD6 1990 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 NAV3Q8IVL0 2385 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 PLSCR5A0PG75 271 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 ZNF878C9JN71 531 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 M0R135 149 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 COL8A2P25067 703 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 MAGEB1P43366 347 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 ZNF81P51508 661 aa11.79□□□□□ -0.52
HERPUD1-210ENST00000565966 MMP15P51511 669 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms