RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 POLR3KQ9Y2Y1 108 aaPredicted RBP13.19□□□□□ -0.3
CDH3-204ENST00000565453 CDH10Q9Y6N8 788 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 TCRBV5S2A0A599 114 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 F5H0A9 414 aaPredicted RBP13.18□□□□□ -0.3
CDH3-204ENST00000565453 BHLHE40O14503 412 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 MLNRO43193 412 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 FOXH1O75593 365 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 KRT36O76013 467 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 ACSM4P0C7M7 580 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 ADRA2CP18825 462 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 NOS3P29474 1203 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 MMP16P51512 607 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDH3-204ENST00000565453 SLC36A3Q495N2 470 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 ZNF362Q5T0B9 420 aaPredicted RBP13.18□□□□□ -0.3
CDH3-204ENST00000565453 SLC35F1Q5T1Q4 408 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 ZNF770Q6IQ21 691 aaPredicted RBP13.18□□□□□ -0.3
CDH3-204ENST00000565453 CYP2R1Q6VVX0 501 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 USP43Q70EL4 1123 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 SPICQ8N5J4 248 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 OR9Q2Q8NGE9 314 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 OR52E2Q8NGJ4 325 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 ST7LQ8TDW4 575 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 MEGF10Q96KG7 1140 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 SLC30A2Q9BRI3 323 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 PLA2G12AQ9BZM1 189 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 TRIM15Q9C019 465 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 GCM1Q9NP62 436 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 PPP1R3CQ9UQK1 317 aa13.18□□□□□ -0.3
CDH3-204ENST00000565453 ARHGAP32A7KAX9 2087 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 A8MXK9 166 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 H0YL77 283 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 TMEM178BH3BS89 294 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 SLC6A9P48067 706 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 HILS1P60008 231 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 SEC61A1P61619 476 aaKnown RBP13.17□□□□□ -0.3
CDH3-204ENST00000565453 BTG1P62324 171 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 MXRA7P84157 204 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 CLEC12AQ5QGZ9 265 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 FITM2Q8N6M3 262 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 ATG16L2Q8NAA4 619 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 OR10AD1Q8NGE0 317 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 OR8D4Q8NGM9 314 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 OR10S1Q8NGN2 331 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 OR13G1Q8NGZ3 307 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 ZNF418Q8TF45 676 aaPredicted RBP13.17□□□□□ -0.3
CDH3-204ENST00000565453 ZNRF4Q8WWF5 429 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 MAP6Q96JE9 813 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 WDR76Q9H967 626 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 MMP26Q9NRE1 261 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 IL20Q9NYY1 176 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 PCDHB10Q9UN67 800 aa13.17□□□□□ -0.3
CDH3-204ENST00000565453 TRAPPC2LH3BP13 241 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 IFNL4K9M1U5 179 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 TNFRSF11BO00300 401 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 RGS9O75916 674 aaPredicted RBP13.16□□□□□ -0.3
CDH3-204ENST00000565453 GASTP01350 101 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 PSKH1P11801 424 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 PYCR1P32322 319 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 TRAP1Q12931 704 aaKnown RBP13.16□□□□□ -0.3
CDH3-204ENST00000565453 ECH1Q13011 328 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 TUSC1Q2TAM9 212 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 RPL13AP3Q6NVV1 102 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 KLHL36Q8N4N3 616 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 LINC00471Q8N535 108 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 ZNF420Q8TAQ5 688 aaPredicted RBP13.16□□□□□ -0.3
CDH3-204ENST00000565453 NANPQ8TBE9 248 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 ZNF582Q96NG8 517 aaPredicted RBP13.16□□□□□ -0.3
CDH3-204ENST00000565453 PITX2Q99697 317 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 ATF6BQ99941 703 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 VNN3Q9NY84 501 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 KCNG2Q9UJ96 466 aa13.16□□□□□ -0.3
CDH3-204ENST00000565453 B2RBV5 119 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 F5H5K5 113 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 F5H5P2 479 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 HLA-DQA2P01906 255 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 SELEP16581 610 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 ZNF12P17014 697 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 ANOS1P23352 680 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 MDH2P40926 338 aaKnown RBP13.15□□□□□ -0.3
CDH3-204ENST00000565453 PMELP40967 661 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 MNAT1P51948 309 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 PRSS12P56730 875 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 GK2Q14410 553 aaPredicted RBP13.15□□□□□ -0.3
CDH3-204ENST00000565453 ZNF181Q2M3W8 571 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 LCN8Q6JVE9 175 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 LYPD4Q6UWN0 246 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 ARHGAP24Q8N264 748 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 CYB561A3Q8NBI2 242 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 OR52L1Q8NGH7 329 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 OR2AJ1Q8NGZ0 328 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 DVL3Q92997 716 aaPredicted RBP13.15□□□□□ -0.3
CDH3-204ENST00000565453 SLC6A7Q99884 636 aa13.15□□□□□ -0.3
CDH3-204ENST00000565453 CDADC1Q9BWV3 514 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms