RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-215	ENST00000565442	C5orf47	Q569G3	176 aa		2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	UBALD2	Q8IYN6	164 aa		2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	H1FOO	Q8IZA3	346 aa	Predicted RBP	2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	OR11H7	Q8NGC8	314 aa		2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	OR52E5	Q8NH55	327 aa		2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	FLYWCH2	Q96CP2	140 aa	Known RBP	2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	CAMK2N2	Q96S95	79 aa		2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	MTG1	Q9BT17	334 aa	Predicted RBP	2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	NTN4	Q9HB63	628 aa		2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	DDX19A	Q9NUU7	478 aa	Known RBP	2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	PDP1	Q9P0J1	537 aa	Predicted RBP	2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	OPN4	Q9UHM6	478 aa		2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	ZNF835	Q9Y2P0	537 aa		2.6	□□□□□ -1.99
CHD9-215	ENST00000565442	TNS2	Q63HR2	1409 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	KCNE1B	A0A087WTH5	132 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442		A0A0U1RQV1	116 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	TMEM150B	A6NC51	233 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442		M0R3G1	203 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	ZNF207	O43670	478 aa	Known RBP	2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	YIF1A	O95070	293 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	CTSL	P07711	333 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	ZNF806	P0C7X5	589 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	MUC1	P15941	1255 aa	Predicted RBP	2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	RPS5	P46782	204 aa	Known RBP	2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	IRF8	Q02556	426 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	ART3	Q13508	389 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	TCEAL5	Q5H9L2	206 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	AVPI1	Q5T686	147 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	SNX20	Q7Z614	316 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	NKAIN4	Q8IVV8	208 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	WDFY1	Q8IWB7	410 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	KATNAL2	Q8IYT4	538 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	JAGN1	Q8N5M9	183 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	BBOF1	Q8ND07	529 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	GPR26	Q8NDV2	337 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	OR4K5	Q8NGD3	323 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	OR56A4	Q8NGH8	313 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	TCEAL3	Q969E4	200 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	PTX4	Q96A99	478 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	DCPS	Q96C86	337 aa	Known RBP	2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	NRBF2	Q96F24	287 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	ZNF488	Q96MN9	340 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	RNF145	Q96MT1	663 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	HSD17B10	Q99714	261 aa	Known RBP	2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	FOXC2	Q99958	501 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	LZTS2	Q9BRK4	669 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	SLC38A10	Q9HBR0	1119 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	MRM3	Q9HC36	420 aa	Known RBP	2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	RABL2A	Q9UBK7	228 aa	Predicted RBP	2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	RCL1	Q9Y2P8	373 aa	Known RBP	2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	HYOU1	Q9Y4L1	999 aa		2.59	□□□□□ -1.99
CHD9-215	ENST00000565442	TRIOBP	Q9H2D6	2365 aa		2.59	□□□□□ -2
CHD9-215	ENST00000565442	COL22A1	Q8NFW1	1626 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	TRAV19	A0A0A6YYK7	116 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	IGKV1-8	A0A0C4DH67	115 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	SYCE1L	A8MT33	242 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	DNASE2	O00115	360 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	GABRP	O00591	440 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	BET1	O15155	118 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	FCN3	O75636	299 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	IFNW1	P05000	195 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	OR8U9	P0C7N5	309 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	LINC00869	P0C866	280 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	UBC	P0CG48	685 aa	Known RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	CD37	P11049	281 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	PMEL	P40967	661 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	NBL1	P41271	181 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	RBM34	P42696	430 aa	Known RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	SLC11A1	P49279	550 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	KIR2DS1	Q14954	304 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	TRMT5	Q32P41	509 aa	Known RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	CHRFAM7A	Q494W8	412 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	OR6Q1	Q8NGQ2	317 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	ZNF461	Q8TAF7	563 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	AGR3	Q8TD06	166 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	RGP1	Q92546	391 aa	Predicted RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	DYNLL2	Q96FJ2	89 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	NARS2	Q96I59	477 aa	Known RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	SPIN2A	Q99865	258 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	SPIN2B	Q9BPZ2	258 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	OR52D1	Q9H346	318 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	PIGU	Q9H490	435 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	LYRM4	Q9HD34	91 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	MRPL22	Q9NWU5	206 aa	Known RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	CLN6	Q9NWW5	311 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	SLC39A1	Q9NY26	324 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	AHSP	Q9NZD4	102 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	MYEF2	Q9P2K5	600 aa	Known RBP	2.58	□□□□□ -2
CHD9-215	ENST00000565442	RFNG	Q9Y644	331 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	PHLPP2	Q6ZVD8	1323 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	WDR19	Q8NEZ3	1342 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	PALLD	Q8WX93	1383 aa		2.58	□□□□□ -2
CHD9-215	ENST00000565442	SMIM26	A0A096LP01	95 aa		2.57	□□□□□ -2
CHD9-215	ENST00000565442	TRAV25	A0A0B4J276	109 aa		2.57	□□□□□ -2
CHD9-215	ENST00000565442		A0A0J9YXV3	536 aa		2.57	□□□□□ -2
CHD9-215	ENST00000565442	TSPAN11	A1L157	253 aa		2.57	□□□□□ -2
CHD9-215	ENST00000565442	C5orf63	A6NC05	138 aa		2.57	□□□□□ -2
CHD9-215	ENST00000565442	SUPT3H	B4E1H0	165 aa		2.57	□□□□□ -2
CHD9-215	ENST00000565442	GOLGA8T	H3BQL2	631 aa		2.57	□□□□□ -2
CHD9-215	ENST00000565442	NME4	O00746	187 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms